Pseudomonas fluorescens AU11122, AA047_RS07700
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU11122 Contig_41, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGACAGCAGCGCAAAAATCTCAATGGCCCGCGCCGTAGGTTCCATGCTGCGCCCGGTCCGCACGAACAGCGGATCATCGAACAGGTTGCGCAGGCGCGAT AACGCCGCACTGATCGCCGGTTGGCCGAGGAACAATTTCTCTGCGGCACGGGTCACACTGCGTTCATGCATCAAGGTTTCAAAGACGATCAGCAGGTTAA GATCGACGCGACGCAAGTCGTTACGGTTCATCTCGCTGGCTTCACAGGCGGGTCTAGAGGGACTTAGGTGACGGATCTTACGGGCATACAGGCCAAATCG TCACTGCCTAGATTTGCTTTCTGATTGCCTGATCGGATTAACTTTGCGCTTTGAGCAGCTTTTTGACGGCCTCGGTGTCGCAAGAACCGCGGCCGCCGAT CAATGTCAGACATGTCGACTATTAATGCTGTCTGTTAGTCTTGCGCACAAAGCCCCGATAAAGTCCTGGGGTATTAGCGATTAATTTGGCGAGGTTTGCG
|
|
| DNA Sequence for Gene |
>AA047_RS07700
ATGTCGCGCACGATCCGTTTTCACAAGTTTGGCTCGGCCGAGGTGCTCAAGTGCGAAGAGCACGAGGTCGCTGCGCCCGCGCCCGGAGAAGTGCAGGTGC GCGTCGAAGCCATTGGTATCAGTTGGTACGACGTGCTCTGGCGGCAAAATCTGGCACCGTCACAGGCTCGTCTGCCCGCCGGTATCGGTCAGGAGATGGC GGGGGTCGTGACCGCAGTGGGTGAGGGCGTGAGTGACTTGAAGCCGGGCGACAAGGTGGCCAGCTTTCCTGCGCACAGTGCCAATGACTACCCGAGCTAT GGCGAGCAGGTCCTGATGCCGCGTTCTGCCCTGACCCTCTATCCTCAGGTGCTGAGCCCGGTGGAGGCCAGCGTGCATTACACGCCCTTGTTGATTGCCT ATTTCGCCTACGTGGACTTGGCGCGGGTCAAGCCGGGGCAGACCGTGCTGATCACCGACGCCAGCCATTGCGCAGGGCCTTCGTTCGTGCAGATGGGCAA AGCGTTGGGCGCCAAGGTGATCGCGGCCACCAAAGATGCCGCCGAGCGCGATTACTTGTGCGAACTGGGCGCCGACAAAGTGATCGTTACCGAAGAACAG GACTTGCTGATGCAAATCAACAAGATCACGGACGGTCGAGGCGTAGACACTGTGTTCGACGGGTTGGGCGGGCCGCAAATGTCAGTGCTGGGCGATGTGC TTGCCCCGCGCGGCAACCTGGTGCTTTACGGTTTGCAAGGCGGTAATCAAACGCCATTTCCGGCCTGCGCGGCGTTCCAGAAAAACATTCAGTTCTTTGT GCATTGCATCGGTAATTTCACCGGCAAGCCGGAATTGGGTATCGCTCAGGACCAAGAGGCCATGGCCCGTGCGTTGCAAGCCATCAATGAATGGACGGCC GACAGGATCCTGCGCCCGCTGGTGGTCAAAGTGTTTCCTTTCGAGGAGTTTGTGCAAGCGCATCGTTATATGGATGAATGCCCGTGCAGAGGGCGAGTCG CCCTGCAAGTGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GTTCGCATCGTGTTAACGGGCTGATGAAAACGTCACCCACCCTGGATGAGGGTGGGTGACGTTTTTGTTTGGGTTAATCATTCAGGTTGAAACTTCTCGG TTTGATGTTTAAAGGCTATTCGATGTGTTTAAAGTGTTCGAGGATTACTTTGTGGTCTTGTTAAACATTAAAGTGTGACCGGTCAGTCTAATTATTTATA TGCTCAAATGGCTTTTCATTTGGGTGCGAATACTGATAGCTTACTGATGGCCACTCATATGGAAGTTGGTTGGCATTGGGCGCATCTGGATGAATGCTAG TTGCGTAGTCTAATTCTTACATTTAAGTAATACCTCTCCTTGTTTTTATAGGGCGGGTATGTCTGGCCGCTTTGAGTGTGCCTGCGAATACTAATAAGAC GTTGCGGAGGGTTAACCCATGAGTACCTTTCATGAGCAGGCCATGAGCTTTGTATATCAACAAGTTCTGCATCGCCTGACAGGGTTCTTCAGTCGGCATG
|
|
| Amino Acid Sequence |
>alcohol dehydrogenase
MSRTIRFHKFGSAEVLKCEEHEVAAPAPGEVQVRVEAIGISWYDVLWRQNLAPSQARLPAGIGQEMAGVVTAVGEGVSDLKPGDKVASFPAHSANDYPSY GEQVLMPRSALTLYPQVLSPVEASVHYTPLLIAYFAYVDLARVKPGQTVLITDASHCAGPSFVQMGKALGAKVIAATKDAAERDYLCELGADKVIVTEEQ DLLMQINKITDGRGVDTVFDGLGGPQMSVLGDVLAPRGNLVLYGLQGGNQTPFPACAAFQKNIQFFVHCIGNFTGKPELGIAQDQEAMARALQAINEWTA DRILRPLVVKVFPFEEFVQAHRYMDECPCRGRVALQV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|