Pseudomonas fluorescens AU11122, AA047_RS14540

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU11122 Contig_39, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCATGTGAATATTGGCACGGGGTTTGCTCTATCCAGAGCAAGAAGGACCTGAACCACATGTTCAGGTCAGCCCACAAAGGTTTTTCGACATGAGCATCAG CTTCGATAAAGCGCTCGGTATCCATGAGCAAGCCCTGGGTTTTCGCGCCCAGCGCGCTGAAGTCCTGGCCAATAACATTGCCAACGCCGACACCCCGAAC TACAAGGCTCGGGATCTGGATTTTGCTTCTGTGCTCGCGGCACAGAATGACAAGAACAAGAACGGCAGCTTTGCCTTGAACATGACCAACAGTCGCCACA TCGAAGCCCAGGGCTTGAGCAGCGGCGATGAATCGCTGTTGTACCGCACGCCGATGCAGCCCTCCATCGACCAAAACACGGTCGACGCTCAGCTCGAACA ATCGAATTACGCAGAGAACGCGGTCAACTTCCAGGCCAGCTTCACCCTGCTCAACAGTAAATTCAAAGGGCTGGTGTCAGCCCTGCGCGGAGAGTAATCC
DNA Sequence for Gene
>AA047_RS14540
ATGTCTCTAGCCAGTGTTTTCAATATTGCCGGTAGCGGCATGAGTGCTCAGACCACGCGCCTGAACACCGTGGCCAGTAACATTGCCAACGCCGAAACCG TGTCGTCGAGCATCGACCAGACTTACCGCGCACGGCACCCGGTGTTTGCCACCATGTTTCAAGGTGCGCAAAACGGCACAGGCGATTCGCTGTTCCAGAA TCAGGATGCCGCCGGGCAGGGCGTACAAGTACTGGGCGTGGTCGAAGACCAGAGCAACCTCGAAGCCCGCTACGAACCGAACCATCCTTCTGCCGACGCC AAGGGGTATGTGTACTACCCCAACGTCAACGTGGTTGAAGAAATGGCTGACATGATTTCCGCCAGTCGTTCGTTCCAGACCAACGCAGAAATGATGAACA CCGCCAAAACCATGATGCAGAAGGTCCTGACCCTCGGTCAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TAAGGAACGACGCAAATGAGTGTGACCGATTCCGTCAGCAACAAGACCCTTAATCAGGTGCTGGCCAACTCCTCTCAGGCCAAGGCCACGGACACCAGCC TTGCGGCTGCTTCCAAGGCCGTGGCGGGCAACAGCAAGGCATTGGGCAAAGATGCGTTCATGCAATTGCTGGTCACCCAGTTGAAAAACCAGAACCCGCT GGACCCGCAGGACAACACCGCATTCGTTGCGCAGTTGGCCCAGTTCAGCAGCCTGGAAGGCATCACGTCCCTGAACGAATCGGTGACGGCCATCACCGGC GGCTTGCAATCCTCGCAGGCGCTGCAGGCTTCGTCGCTGGTAGGGCGTTCCGTGATCGTGCAAACCGGTGAAGCCTTGGTGGACCCTGCCAGCGAGAAGC CGTTCAACGGCACCGTGGTGGTCAAAGATGCTAACTCCTCACCCACCATCAAGATCACCGATGCCGATGGCGTTGTGGTCCGAACCCTCGAAATGGGCGC
Amino Acid Sequence
>flagellar basal body rod protein FlgC
MSLASVFNIAGSGMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQGAQNGTGDSLFQNQDAAGQGVQVLGVVEDQSNLEARYEPNHPSADA KGYVYYPNVNVVEEMADMISASRSFQTNAEMMNTAKTMMQKVLTLGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site