Pseudomonas fluorescens AU11122, AA047_RS17435
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:PF13520
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PF13520
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0022857 | transmembrane transporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF13520
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PIRSF | PIRSF006060 | AA_transporter | - | - | 1 | 502 | 3.2E-48 |
| PANTHER | PTHR42770 | AMINO ACID TRANSPORTER-RELATED | - | - | 1 | 482 | 1.9E-49 |
| Gene3D | G3DSA:1.20.1740.10 | Amino acid/polyamine transporter I | - | - | 7 | 479 | 1.4E-47 |
| Pfam | PF13520 | Amino acid permease | IPR002293 | Amino acid/polyamine transporter I | 12 | 462 | 8.3E-54 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.