Strain | Pseudomonas fluorescens strain AU11122 Contig_34, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATCGCCATGGTGCAGGGCGCGTGTATTGCGGGTGGGCTGATGCTGGCCTGGGTGTGCGATTTGATCGTGGCCAGTGACGATGCTTTTTTCCAGGACCCAG TGGTGCGCATGGGGATTCCGGGGGTGGAGTATTTCGCTCATCCGTACGAACTCAACCCGCGCATTGCCAAGGAATTTCTGTTCACCGGAGACCGGATGAG CGCCGAGCGTGCTTATCAAATGGGCATGGTCAATCGTCTGTTCAGCCGAGAGGATCTGGAGGCCGGGACCTACGCGCTGGCCGCAGCCATCGCCCGGCAG CCGCGCATGGGGCTGGCCCTGACCAAGCAGGCGATCAACCACGTCGAAGACTTACAGGGCAAGCGCACGGCGATGGACGCGGTGTTCGCGTGGCATCACT TCGCCCATAGCCACAACGAACTGCTGTCCGGTGACAAACTGGGCGGTTTCGATGCCAAGGCCATGGCCGACGCCAACAAGGCCGCTGCGGGGGAACGCCG
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DNA Sequence for Gene |
>AA047_RS06865
ATGAGTGACTACCTGAACACGGCGTTGACCCAAGCGCTGGGCTGCCGTTATCCGATTGTGCAAACCGCCATGGGCTGGGTGGCGGACGCTCATCTGGTGA TCGCCAGCACCCAGGCGGGAGCCTTTGGTTTTTTGGCCGGGGCGACGATCGCTGCCGATCAACTGGAGGGCGAAATCCAACGGGTGATCGAGGCCACGGG TGGTAGCAACTTCGGTCTTAACTTTCATATGTTTCAGGACAATGCCGCGCAGTGCGTGGACCTGGCCATTGAATACCGCCTGCGTGCGGTGAGTTATGGG CGCGGGCCCGACCGGCAGACCATTGACCGTTTCAAACGCGCCGGGGTGTTGTGCATTCCCACGGTGGGCGCACTCAAGCATGCGATCAAGGCCGTGGAAC TGGGCGCTGACATGGTCACCGTGCAGGGCGGCGAGGGCGGCGGCCACACCGGCGGCGTACCGAGCACCATCTTGCTGCCACAGGTGCTGGATGCGGTGCA GGTGCCGGTGATTGCCGCGGGCGGCTATTCCACCGGGCGCGGCCTGGCCAGTGCGCTGGCGTGCGGTGCGGCGGGGGTAGCCATGGGCACGCGGTTTCTC ATGACCCGTGAATCCCCCACGCCGGTGGCGACCCTGGAGCGTTACCTCAAGGTCAACGACCCGCAGCAGATTCGGGTCACCACTGCCGTGGACGGCATGC GTCACCGGATGATTGAAAATGCCTTTATCAACCGCCTGGAGCGTGCCACTGCGTTTGGCCGTTTGCGCATTGCGCTGGGCAGCGCCTGGCAATGGAAGCA ACAGACCGGCATGAGCGTGCGGCACATGCTCGGGGTGTTTGCCCAGTCGGTCAAAGAAGACCCCGGCGCGCTGTCGCAAACCGTGATGGCCGCCAACCAG CCGGTGCTCTTACAGCGCTCGATGGTCGACGGCGTGCCGGATGAAGGCATATTGCCCAGCGGTCAGGTGGCGGCCGCGATTGGCGAGCTGAAAAGCTGCC AGCAGGTGATTGAGGAGATGGCGCAGGAGGCTGAGCGGTGTTTGCGGGCCGTCAGCACGCCGTATACCCGTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCGAGGCTGACCCAGCGCTGCTCCTGTGCAGCGCGGCGGATGGCGGCGGCCAGGCGCTCCACTTGCCAGGCTTCTTCGAAATCCGGGCCGGGGGCGGGCA CGCCGGCGCAGGCTTGAATCACGGCGTGGACTTCGAGGGTTTTCAGCTCGTTGTAACCCAGTTGATGCCCCGCCGCCGGGCTGAAGGCGGCATAGCCCGG CCAGTCGGGGCCGGACAGCCGGCGCTCGAAACCTGATTGTCCTTGCAGGCACACGTGCAGTTCGTTCAGGCGTTCCTGATCGAACCTGAGCGTGCCCAGG GTGCCGCTGATTTCGACGCTCAGGTGGTTTTTGTAGCCGTGTTTGAGCCAACTGCTGCTGACGCTGCCGCGGGCGCCATTGCGAAAGCGCAACAACGCGT GGGTCTGGTCGTCCACGTGGATCGGTGTGTCCCGCGGGTCGGTATGACTGGCGGGTCGCAGCGGGTGGACAGTCTGGCTGTCGGCGCACACCGCCTCGAC
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Amino Acid Sequence |
>2-nitropropane dioxygenase
MSDYLNTALTQALGCRYPIVQTAMGWVADAHLVIASTQAGAFGFLAGATIAADQLEGEIQRVIEATGGSNFGLNFHMFQDNAAQCVDLAIEYRLRAVSYG RGPDRQTIDRFKRAGVLCIPTVGALKHAIKAVELGADMVTVQGGEGGGHTGGVPSTILLPQVLDAVQVPVIAAGGYSTGRGLASALACGAAGVAMGTRFL MTRESPTPVATLERYLKVNDPQQIRVTTAVDGMRHRMIENAFINRLERATAFGRLRIALGSAWQWKQQTGMSVRHMLGVFAQSVKEDPGALSQTVMAANQ PVLLQRSMVDGVPDEGILPSGQVAAAIGELKSCQQVIEEMAQEAERCLRAVSTPYTR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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