Pseudomonas fluorescens AU11122, AA047_RS00345
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU11122 Contig_33, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCTATGCCTCAACATCCCTGAATAACTTCAAGCCTGTTGGAAGGGCCTGACCTAAGATGTTTTAAATCTGCGCGGTCTGCTCACTGTTTAATAGCCATTC ACCTTCTGCCATTGCGTTAAGACTTTATATGGCCGAGCGCTTGAACGATTTGATCGTTAAAAAGTGGTCGCGATCACGCTCAAACTTAATCAAACGATCG TCTGGAGCGGCAGGCAAAAACCACTGATACACAGGTACATAAGCCCTTCTGCTTGACTACTGTTTGATCGATTTGGCAGTTTATGCACCCGCGGTGTCGT CTTACTTACCGAAGGGTTTACCTTGCTTGTCGCAGACCTCAACGGCTCCATGCTGGTTGATAGCCCCCTTCATAACGCGCTTCATTCAGCCTTCATACAG AAATTTCACCTGATGTGATCCATGCTCTGGGTATGATTTGGGCCATGTGTTATTGCTCTATGGTCTCTCATTACTCATTCACATCGGACGTCACGCCTTT
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| DNA Sequence for Gene |
>AA047_RS00345
ATGAGCTCGCTGCCCTTCTTGCCGTTTTCCAAACCAACCATCGATGAAGCCACCATTGCTGCCGTGGGCGACGTGTTGCGCTCGGGCTGGATCACCAGCG GGCCAAAGGTTCAGGCATTCGAGGCGCAATTGTCCGAGTACGTGGGCGGTCGCCCGGTGCGCACGTTCAACTCCGGCACGTGCACCATGGAAATCGCCCT GCGCATCGCAGGGATCGGTGCAGGTGACGAAGTCATCACGACGCCGATCTCATGGGTCGCCACTGCCAATGTGATTCTCGAGGTCGGCGCTACGCCGGTG TTTGCCGATATTGATCCGATCACCCGCAATATTGACCTGAAGAAAGCCGAAGCCGCGATTACGCCACGCACCAAAGCCATCATTCCGGTTTACCTCTCCG GCCTGCCGGTGGACATGGACGCCCTGTACGCTCTGGCCAAAAAACATAACCTGCGCGTGGTCGAAGACGCCGCTCAGGCCCTAGGCGCGAGCTGGAACGG GCAGCGCATCGGCGCACGCGGGGATTTCGTGTCGTTCAGTTTCCAGGCCAACAAGAACATCACCTCGTCCGAAGGCGGGTGTTTGGTGCTCAATAACGAA GAAGAAGCGCGTCTGGCTGAGAAATACCGCCTGCAAGGTGTCACCCGTACCGGATTCGATGGCCTGGATGTCGACGTTCTGGGCGGCAAGTTCAACATGA CTGACATTGCGGCTGCCATCGGTCTCGGGCAGTTCGCCCATATCGAGACGATTACCGCGCACCGCCGTGAATTGGCCAAGCATTATTTCGAGTGTTTCGG CCCTGACTTTGAAGCCGAATACGGCGCGCAATTGCCTGTGGCTGATTTCAGCACTACCAATTGGCACTTGTTCCAGCTAGTGCTGCCTGAGCGCAAGGAC GGCCAACCGGCACGGGCTACGTTCATGAAAGACATGCAGGCATTGGGCGTGGGCGTGGGCTATCACTACCCGCCCATTCACTTGCTGAGCCTGTATCGCG CGCAAGGTTTCAAAGAAGGGATGTTCCCCGTCGCAGAACGCGTAGGGCGGCTGATTGTGTCATTGCCGATGTTCACAGCGATGACCAAAGCCGATGTGGA GCGGTCGGTTAAAGCCGTCAAGGCCGTGTTGCAGAACGCGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGATTTCGCTGCCGGTAGAGAGGTCTACCGGCAGCGACCGTCCCGCCGAGGCTTACTCGCCAATGGCGGCTTTGTAGCCAGCAGCATCCAGCAGTCTGT CCAGCTCAGCGGTGTTGCTTGGCTTGAGCTTGAAGATCCAGCTCGCGTAAGGATCGCTGTTCAGGTTTTCAGGGCTGTCGGCCAGCGTCTCATTGACCGC GATCACTTCACCGGACACTGGCGCATAGATGTCCGAGGCGGCTTTTACCGACTCCACGACGCCTGCGGTGTCGCCTGCGGCAAACACTTTGCCCACTTCG GCCAACTCAACGAACACCACATCCCCCAACGCTTCCTGAGCGTGATCACTGATACCCACAGTGACAGTGCCGTCCGCTTCCAGACGGGCCCACTCGTGAC TTTCGGCAAAGCGCAACTCAGCGGGGATATTGCTCATATTCAGTGTCCTCAATAAGAAATGTCAGCCGCTTGCACACAGCGCAAGCCTGCCGGTAAACGT
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| Amino Acid Sequence |
>aminotransferase DegT
MSSLPFLPFSKPTIDEATIAAVGDVLRSGWITSGPKVQAFEAQLSEYVGGRPVRTFNSGTCTMEIALRIAGIGAGDEVITTPISWVATANVILEVGATPV FADIDPITRNIDLKKAEAAITPRTKAIIPVYLSGLPVDMDALYALAKKHNLRVVEDAAQALGASWNGQRIGARGDFVSFSFQANKNITSSEGGCLVLNNE EEARLAEKYRLQGVTRTGFDGLDVDVLGGKFNMTDIAAAIGLGQFAHIETITAHRRELAKHYFECFGPDFEAEYGAQLPVADFSTTNWHLFQLVLPERKD GQPARATFMKDMQALGVGVGYHYPPIHLLSLYRAQGFKEGMFPVAERVGRLIVSLPMFTAMTKADVERSVKAVKAVLQNA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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