Pseudomonas fluorescens AU11122, AA047_RS20880

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU11122 Contig_32, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGGATGCGTGCATAGGCCGTCTACCTGCGGCCATTACAAGGAGTCAATCATGACCAAGACTGTTATCACCAGCGACAAGGCACCTGCGGCCATCGGTACT TATTCCCAGGCGATCAAAGCTGGCAATACCGTCTACATGTCCGGTCAAATCCCGCTGGACCCAAAAACCATGGAACTGGTTGAAGGCTTCGAAGCCCAGA CCATCCAGGTGTTTGAAAACCTGAAGTCGGTGGCCGAAGCAGCAGGCGGTTCGTTCAAGGATATCGTCAAGCTGAACATCTTCCTGACTGACTTGAGCCA CTTCGCCAAGGTCAACGAGATCATGGGCACTTACTTCGAACAACCTTACCCGGCTCGTGCAGCCATTGGTGTTGCAGCCCTGCCAAAGGGTTCGCAGGTT GAGATGGATGCCATTCTGGTTATCGAGTAATGCCCCTCGGCGCAGCGTCCTCATGCTGCGCCAACTCCCCCGCTTTTCCCCGTTTTAAAAGGATTCCACC
DNA Sequence for Gene
>AA047_RS20880
ATGCGCAAAGCGTTAGCCTTGTCACTGCTCACCGTTTTTCTGGGTGGCTGTGCCAACGAACCCGCCCACCGCGATGTCAGTGGTATCTGGATCAACCAGG CTGCGATTGATGCAGCTGCCCAAGGTGGCAACCTGCGTGAAGCGTTGCTGACTTACGGTCCCAACCTTGAGTGGGACATTGATACCCAGCGTGCTCAAGC CCGCTACACCAATGGTTTCGAACGTGTCGAAGGCAAATTGCAGCCCGAAGACAAGGGTGTGTGGCAGGTTAATTTTTATGGCAGCACGGCAACGGCCTTG AGTGTGGAGGGCGATGAGCTCATCCAGGCTGCGGCTGACGCCGACCCTCAGCAATCTTTCGTACGATCACGCGTCAATGTGATGGCCGATGACCCGCTTG GAACCAGCTTCGAAAAAGCGCTCAAAGCAGCTTACCTGGGTGGCCCGTGGCGCATTCAGAGCGGCGCTGGGCAAGGTGGTACGGTGACGTTTACACCGGG TGGCCAGCTCACGGGGTTGCCGGGCATGAATGCCTACGCGCTGTGTCTGGCGGGCGATTGTGCGTCGATGAGCGGTGAGTACGACAGCCTGTGGCTGCAG CAGGGTGATGCGGGCGCCGCTCACATTTTCGTGCGTAAAGGTAAGCAGCTCGAAATCTTTGAAGCGCTGGATGCATCGCAACCTGACGAAATGCCTCAGT TGTATCCGGGCAAGCGTGAATGGGTGCTTGAAAAACAGAGTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGTACGCGGGAGCCAGATTAACAGCTCCCGCCCTTGCCTATGATTAAGCCTGCCCTGCCAGAATTGCCGCATAACCTTCACGGTAGCTCGGGTAGCGCG GTTCCCAGCCCAATGCCCTGGCCCGCGCGTTGCTGCATCGCTTGCTACCTGCGCGTCGCACGCTAGCTTCGTCGCTCCATTGTGTGACGCCCAATTGCCC ACGCAGCCAGTCGACCACATCTGCCAGCGGTGCAGGCTCGTTGTCGACACCGATGTAACAATCGTCCAGCTTTTTGCCCTGCCGGTGCGCTTCCAACAAA AAGGCCAGTAACCCGCCTGCATCGTCCGCATGGATGCGATTGCCATACAGCGGCGGATCACGCTCTACGCGATAGCCTTTGCGCACTTGCCCCAGCAGCC ACTCCCGGCCCGGTCCATAAATGCCGGTCAGGCGTACAACGCTGGCGGGGATGCCGCTGTTCAACGCGAGCTGTTCGGCATCGAGCATGATGCGGCCTGA
Amino Acid Sequence
>lipoprotein
MRKALALSLLTVFLGGCANEPAHRDVSGIWINQAAIDAAAQGGNLREALLTYGPNLEWDIDTQRAQARYTNGFERVEGKLQPEDKGVWQVNFYGSTATAL SVEGDELIQAAADADPQQSFVRSRVNVMADDPLGTSFEKALKAAYLGGPWRIQSGAGQGGTVTFTPGGQLTGLPGMNAYALCLAGDCASMSGEYDSLWLQ QGDAGAAHIFVRKGKQLEIFEALDASQPDEMPQLYPGKREWVLEKQS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site