Pseudomonas fluorescens AU11122, AA047_RS19660

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005576 extracellular region
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01592
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01592 Low calcium response V antigen signature IPR005413 Low calcium response V antigen 248 269 2.1E-44
PRINTS PR01592 Low calcium response V antigen signature IPR005413 Low calcium response V antigen 289 311 2.1E-44
PRINTS PR01592 Low calcium response V antigen signature IPR005413 Low calcium response V antigen 169 192 2.1E-44
Pfam PF04792 V antigen (LcrV) protein IPR005413 Low calcium response V antigen 10 314 2.1E-85
PRINTS PR01592 Low calcium response V antigen signature IPR005413 Low calcium response V antigen 121 141 2.1E-44
PRINTS PR01592 Low calcium response V antigen signature IPR005413 Low calcium response V antigen 144 166 2.1E-44
SUPERFAMILY SSF103388 Virulence-associated V antigen IPR036139 Virulence-associated V antigen superfamily 50 313 1.83E-86
PRINTS PR01592 Low calcium response V antigen signature IPR005413 Low calcium response V antigen 270 289 2.1E-44
PRINTS PR01592 Low calcium response V antigen signature IPR005413 Low calcium response V antigen 99 117 2.1E-44

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.