Pseudomonas fluorescens AU11122, AA047_RS01120

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU11122 Contig_25, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CACGTGTTGTCCGTTGCGCTGAGCAAGGCAGGCATCCAGGCCCGCAGTGCCGCGATGTCGATGCCAGACACACTGGTGATGTGTAAAACCATTCAAGTTG AAACCGGCCTGAACGAGCAGGACCTTGAACTGCACGTGCGCCTTGAAGCGGAACACTACGTCCCATACAACCTCGATGAAGCCGCGCTGGATTTCGACGT GTTGGGGCCTTGCGCCGATGACCCGTACCGCACGAACGTATTGCTGGTGGTGTGCCGCCAGCAAGCGCTTGAGTGGCATCAATCGGTTCTGGTGCAGGCT GGCTTGCAGGCGAAGGTCATTGATGTGCGCGATCACGCCCATGCCCGGGGCCTGCACTGGTTGAGTGGCGTGCCCGGTTATCAGCCGGACAACCCGTTTG CCGGGGTGAAAATCCATCCCCGCCTCGCGCCCGAAGCACTCTTCTGCGATGCTGCGCAGCTGTTGACAGCCTGTGGTCTGGCCTTGAGGGGGTTCGATTG
DNA Sequence for Gene
>AA047_RS01120
ATGGCGCGAATCAATTTGTTGCCATGGCGTGAGTGGCTGCGCGAAAAGCGCCGCAAAAGGTATATAGGCATGCTGGTGGCGTTGCTGGTAGTCACGGCTG CGGGTTTGTTTGTGCTGGATCATTTTGTGGACCGCGCCGTGGAGCGGCAGTTGGCGCGTAATGACCTGATCAGGAGCGCCATGGTCCAGTTGGATGGGCG TGCGCAGCAGATCGATCAGTTGAAAGTACGTCGCGAGCAATTGCTGGAGCGCATGCAAACCATCGAGACCCTGCAAGGCAATCGTTCGGGCAGCAGCATC GTGCTTGATCAACTGGCGCGCAGTTTGCCGGAAGGTGTGTACTTCACTGACGTGAAGATGGCCGAGCGCACCATTGCGATCACAGGGGTGGCGCAGTCCA CTGCACGGGTCGCCGAGTTGATGCGCAATCTCGACGCCTCCCATTGGCTTGAAGCCCCCACGTTGATTGAAGTGCGCGCCGAAGACGGTCAGGACGCCAG CCCCGCCCGGTTATTTCACATGACCGTGCTGCAATCGCAAAACGGCCATGATGGCGGGCAGTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGGTCGCGCACTGGCTGGAGAGCCTGCGTACGGTTGACCTGCATGAGTTGAATCTCAAACAGGCCGGGACGTGGTCAGGCAAGCGTAAAGCAGGTGTCGC GACCGGGTTTGTGGCGTTGCTGGTGCTGGCGGGTTATGCGCTCTGGTTGCAGCCCGGGCTGGCCCGGCTTCATGAGCAACGCAGCGCCGAGCCCGTACTC AAAGCCCAACTGGCAAACCGTGCCCAAGAGGCAGCATCACTGGTTGATCACCACCAGCACCTTCAAGCATTACAAACGGCCTTCGACGAGGTGATGCGGC AACTACCGCGCCAGTCCCAGGTGCCGGGGCTGCTGGATGAAGTGTCCCGGCTTGCCCAAAACAGCGGCCTGATCATCGAGCAGATCCAGTGGTTGCCTGA AACACTGCAACCCGCTTACAGCGAGCTCCCTCTGCAATTGAGGGTCGTGGGCGGGTATCACGACCTTGGGGTTTTTCTCAGTGGTATTGCGGGTTTGCCA
Amino Acid Sequence
>pilus assembly protein PilN
MARINLLPWREWLREKRRKRYIGMLVALLVVTAAGLFVLDHFVDRAVERQLARNDLIRSAMVQLDGRAQQIDQLKVRREQLLERMQTIETLQGNRSGSSI VLDQLARSLPEGVYFTDVKMAERTIAITGVAQSTARVAELMRNLDASHWLEAPTLIEVRAEDGQDASPARLFHMTVLQSQNGHDGGQF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site