Pseudomonas fluorescens AU11122, AA047_RS05710

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU11122 Contig_24, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGGATAATGTGTGGCCTGCGCTAAAACCGTTGCTTTGATGCTTTTCTAGTCGCAGCGTTTCGGCTAAGGTGGCGCCCCCCCGATTTGGAGCCCCCGATG TCGCGTCCTGCCTGGTCTTTATATGCCTATCAACTGATCGAGCCCGATGAACAGCTCGATTTGTTCGCCTGCCAGGAGGTACGGGTGCATCTGGTGACGC GTCAATTGGAGCTGGGAGGCACCATTGACCGTACGTTGTGCGGCTCGTTGCTGCCTGCGCAGCCGCGTTGGTCGGACGTCACGCGCAAGGTGTTTCAGGA CCACCGCCTCTGCCCGCTGTGCCGCGCAATCATTGAATCGCAGCGCCGCGGCACSGAGCCGATCTGGCCCGAATTGCGCTTTGAACTATGATCTACCTCG TCTGACTGTTTTGGCGAGGTACGCCGCCTCCTGAACCCGGCAGGCTGCGTGTACACTTTCCCCCTTTTGTCCCCCGTTGATTATGCGAAGGATGTTCCGG
DNA Sequence for Gene
>AA047_RS05710
ATGTTGTCGCGCCTACCTGCCGTCACCCGTTGTCTGTCAGTTGCCGCACTGTGTGTGGCAGGCCCTGTTGCTGCTCTTGAGTTTCCGTTGCCACCGCCCG GTGAAGACGTGGTGGGGCAGGTACAGGTCATCAAGGGCCGCTACGAAGACTCCTTCGCAGACTTGGGCAATGAGCATGAGCTGGGCTATTCGGAGATGAT CGCGGCCAACCCCGGCATCGATGCCTGGCTACCGGTCAAAAAGCACCCCGATGGCACGCTGGTAGACACCGACATCGTGTTGCCAACCCAGTTCATCCTG CCACCCGGCAAGCGGGAAGGGATCGTGATCAACCTGGCCGAATACCGGTTGTATTACTTCCCCAAAGGTCAAAACAAGGTGTACACCTTTCCGCTGGGGA TTGGTCGTGAGGGCTGGGGGTCGCCGTTGGGCCAGACCCGAATCACCGCCAAGACGCCGAACCCGACCTGGACGCCCCCTGCGTCGATCAAGGCTGAACA TGCCCGCAATGGTGATCCGCTGCCCAATGTGGTGCCCGCGGGCCCGGACAACCCTCTGGGGCCTTTCAAGTTCACGCTGGGCATGCCGGGTTACCTGATC CATGGTTCCAATGCCAAGTTCGGTATTGGCACGGGCACGAGCCACGGCTGTTTCCGCATGCTGAACAAGAACGTCTTGCAAATGTCGCAGTTGGTGCCTG TGGGGACGCCCGTTCGCATTATCAACGAGCCTTACAAGATGGGCGTAAGTGGCGGCAAGGTGTATCTCGAAGTGCACGAGCCTTTGAACGTCAAAGACGG ATCCCTGCTCGCCAAGAGCGACAAGTCGCATCTGACTCAAGAAGACAAAGAACAAAAGTGGGCTGGTTTCATGAACTTCGTGCTCAAGCACAAAGCACTG GAAAACAGCATTCAGATCGACAAGGAAAAAGCGTTCCCGGTGGTCGTGGCAGAAACGGGAATACCGGCTGAGATCGGAATCAGCACCGCTGTCGTACCGC AAGTGCCTGGTGTGCTCGAAGTGCCAGAAGGGCAATCGCTCGATTACGTGCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGATCTGTTTAAAAGCCGCCGCAGTCACTGACTGCGGCGGCTTTTTAATGCCTGTTGAAAATACCTCAGGCAAAAAAAACCGACCCATAAAATGGGTCG GTTGGTAACAGCCCCGAAGGACTATTACTTGCGGCTTGCTTTTTCAAGCATGCGCAGAGCACGTTCGTTTGCTTCATCAGCAGTCTGTTGTGCTTTTTGA GCAGCAGCCAGCGCTTCGTCAGCTTTACGGTAGGCTTCGTCAGCACGAGCCTGGGAACGTGCTGCTGCATCTTCAGTTGCAGTCAGACGGGCTTCAGTTT CTTTAGATACGCTGCTGCAACCGGTAGCCAGAACTGCGGCCAATGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTCAAGGACTTTCT AATTGAAGCTGCTCCTTCAACATGAGGAAACAGCCGGCGTACATACTACCCATTACTTGTAGTAAGTAAACTGACCTAGCGCAAGAACCAAAAAAAATAA
Amino Acid Sequence
>transpeptidase
MLSRLPAVTRCLSVAALCVAGPVAALEFPLPPPGEDVVGQVQVIKGRYEDSFADLGNEHELGYSEMIAANPGIDAWLPVKKHPDGTLVDTDIVLPTQFIL PPGKREGIVINLAEYRLYYFPKGQNKVYTFPLGIGREGWGSPLGQTRITAKTPNPTWTPPASIKAEHARNGDPLPNVVPAGPDNPLGPFKFTLGMPGYLI HGSNAKFGIGTGTSHGCFRMLNKNVLQMSQLVPVGTPVRIINEPYKMGVSGGKVYLEVHEPLNVKDGSLLAKSDKSHLTQEDKEQKWAGFMNFVLKHKAL ENSIQIDKEKAFPVVVAETGIPAEIGISTAVVPQVPGVLEVPEGQSLDYVQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site