Pseudomonas fluorescens AU11122, AA047_RS02645
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU11122 Contig_23, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCTTTGCCATGATCGACATTGACCATTTCAAGCGGGTCAACGACTCCTACGGCCACCCCATGGGCGACCGGGTGATCAAAAGCCTGGCGCTGTTCCTCA AACAGCGTTTGCGCAAGACCGATTTCATCGGGCGCTATGGCGGCGAAGAGTTTGCCATTGTGATGCCTGACACCGATCAGGAAGCGGCCCACGCGGTGTT GAACACCATCCGCGAGCGCTTCTCGGAGATTCATTACCCGGCCCAGCCCACAGATTTATGCTGCACCTTCAGCGCGGGCGTGGTGGAACTCAAAGAGGAC ACAGACGGCCTGGTCATGGCATCTCAGGCAGACGAAGCGCTGTACCGCGCCAAGCACAACGGGCGCAACCGGATCGAGCGCTTTCACCCGGCAAGGCAAA TTGCCACTATTTCGGTCAAATTGCCGAATCCCGTCACATCGCTGTAACGCACGTGCAATAACTTCAGCCGCTTCTCATTGCGTCGTAGGCAAAATCCCAG
|
|
| DNA Sequence for Gene |
>AA047_RS02645
ATGCGCCTGAAGCTGCTTACCAACCTCAACACCCTGTTGCTGGTCGCCGTGTGCCTCGCCCTCGGCGCCACCCTGGCGTGGTCGCAACACGCGCTTGAAC GGCCGTTTCAACTGATGGAACGCTACTTGAGCCTGTCCCAGCAGTTCCAGAACCAGGTGGCGCGCAATATTGAAGATTACCTGGCCAGCGGCGACGCCCT GCGCCTGAGCGATGCCACGACCGCGCTCAACACGCTGAAAACCGAACTGACCCCGCTCCCGGTTGCGCTGGCCGAGGCCTTGCGCCCCAGCCTCGAACGC CTGAGCACGTACAGTGGCAACGAACTGCTGGCCGCTGGCAAACTGGCCGGTGACCCGCAAGCGTTGCTGTTGCAGGCCGAACGGGAGCTGGGTGCCACTC TGGAGCAACTCAGCCAGTATGCCCATCAAGCCAGCGGCCCCGACGCCCACGCCTATCTGGTGCCGCTGCTCAATGCCTCCCAACACTTGGCAAAACTCTC TTTAAGCCGCGACAAACTGGTCAGTAGCGGGCGCAGTGAGCTGGCGGCGGACGTGGCGCGCGAGCTGGACAACATGCGTGCGCAAGCGCAAACCATCGAG GCGCTGCCTTTGCTGGGGGTCAGCGCCAACAGCGCCTCGGCCAGTGACGATTTCGCGGCACTGATGGGCCTTGAGTCGGAACACACGGGCGCGACCGAAG ACGCTGGCATCCCCCTCAAACGTGAACTCAACAACCTGCTGAGCCGCTACCCCGCCGAGTTGCAACGCACCCGCAGCCAGATCGAACAGCGCGCTCAACT GGCTGACGCCACGCATGAAAAGCTGGGCGCAGTGCAACAAGCCATCGCCGGACTGGAGCCGGCGGTACGCGCTGAGCACGGGCAGATTCAAAGCGAAGTG CGGCTGATTCAGGGCGCGATGATTGGCCTGATTCTGCTGATCGCACTGCTGATCGACACGTTGCAGCGCAGACTGGCCAACGTGTTGACCCGCCTGGTGC CGATGCTGTCGACCTGGGCACAAGGGGATTTCAGCCGCGACATTCAGTTGGGCAAAACCAATCGCGAACTGCACGACATTCAGGCCTCGCTCAATCGCCT GCGCAATTACTTGGTCAATCTGGTGGGCACCTTGCGCGTCAACGCCGAACAGGTGGCAGGCAGCAGTGAGGCGCTGGCCGAGGTGAGCAACGGTTTGCAC AGCGGCGCCGAGCGGCAGGCAGGCGATACGGCGCAAATCCGCGACGCCCTGGGTGAATTGGAAGCGACCATTTCACAAGTGGCGGGTGACGCCAGTCAGG CGGCCGATGCCAGCCGCAGCGCCGGGGTGGCGGTTGCCCAAGGCCAGCGAGTCATTGGTCAAAGTTTGACCGGGCTGCATGCACTGGTGGGTGAAGTGCA AGGCAACGCGCAAATGATCGAGCAACTGGCCGAAGAGTCCGCCACCATCGGTGGCGTACTGACGGTGATTCGCGCCATCGCTGATCAGACCAACTTACTG GCGCTCAACGCCGCCATTGAAGCGGCCCGTGCCGGTGAAATGGGACGCGGGTTTGCAGTGGTCGCCGAAGAGGTGCGCACGCTTGCCCAACGTACGGCAG GGGCGACCGGCGAAATTCAAACCCTGATCGGCGGGCTGCAAACGGCCGCGCGCCAGTCAGTCGAAGGCATGCGCGCCCAGGTCGTACATGCCCGGGACAC CGCCCGGCAGGCGCAAGCCGCCGATGGCGCGCTGGATGAAATCGTCGGGGCGATAGCCACCATCTCCGACACCGCCATCCGCATTGCCGACGTCACTGCT CAACAAAGCGGCGCGGTCAGTGAAATACGCGATCACAGTGAACGCATTCATCAGTTGGGTGACGACAATTTGCAACGCATTAGCCAGGGTCGCCAGCAAG GTGAGCGCTTACTGGTGTTGGGGGGCGAGTTGAATGCCGCGGTGCAGGCGTTTCGGGTGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGCCGGGCGCGCGGATGGTTGCGATACCGCCGCTCCCCATCAACGGTCAGCCCCGCTCGGCACAGCGTTTCTCACTCCGCTATCATGCGCGCACGTTTGA TTAGCGAGATCACTATGCGCCGCCTGTTTTTGCTTTTGTGTTTACTCGTCGCCGTGCCCGCCATGGGCGCGGGACTGTTGGACAACCGCCCCAGCGCTAC GCTGGGCGCCGTGAATAACAGCCGCGATTTTCTGCCGGTCAGCGAGGCGTTCAAGCTCAACCTGATCGAAAGCACGCCCACGAACATCAAGCTGCGTTTT GTGCCGACCGACGGTTACTACCTGTACCAGCACCGCTTTGCGTTCAAAACCGACCCCGCCGATATCACCTTGGGCCCGGTGCAACTGCCGCCCGGCGAAC CCAAGCATGATGAGTACTTTGGCGATGTGCAGGTGTATCACGGCATTGTCGACGTGGACGTGCCGCGCCCGGCTGATGCTCAACGCGCCTTCACGCTTGT
|
|
| Amino Acid Sequence |
>chemotaxis protein
MRLKLLTNLNTLLLVAVCLALGATLAWSQHALERPFQLMERYLSLSQQFQNQVARNIEDYLASGDALRLSDATTALNTLKTELTPLPVALAEALRPSLER LSTYSGNELLAAGKLAGDPQALLLQAERELGATLEQLSQYAHQASGPDAHAYLVPLLNASQHLAKLSLSRDKLVSSGRSELAADVARELDNMRAQAQTIE ALPLLGVSANSASASDDFAALMGLESEHTGATEDAGIPLKRELNNLLSRYPAELQRTRSQIEQRAQLADATHEKLGAVQQAIAGLEPAVRAEHGQIQSEV RLIQGAMIGLILLIALLIDTLQRRLANVLTRLVPMLSTWAQGDFSRDIQLGKTNRELHDIQASLNRLRNYLVNLVGTLRVNAEQVAGSSEALAEVSNGLH SGAERQAGDTAQIRDALGELEATISQVAGDASQAADASRSAGVAVAQGQRVIGQSLTGLHALVGEVQGNAQMIEQLAEESATIGGVLTVIRAIADQTNLL ALNAAIEAARAGEMGRGFAVVAEEVRTLAQRTAGATGEIQTLIGGLQTAARQSVEGMRAQVVHARDTARQAQAADGALDEIVGAIATISDTAIRIADVTA QQSGAVSEIRDHSERIHQLGDDNLQRISQGRQQGERLLVLGGELNAAVQAFRV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|