Pseudomonas fluorescens AU11122, AA047_RS02285

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU11122 Contig_23, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AAGTTCCTGTTCATTTACATCGTGCTGTTTCTGGTCGTGCTGTTGGTGCTGTACATCAAGCATCGCTTGACCCGCATGCCCATCGGCCGCGCTTGGGAAG CCCTGCGCGAAGATGAAATTGCCTGTCGCGCCATGGGGCTCAATCACGTCTTGGTCAAACTGTCGGCGTTCACCCTGGGGGCGTCCACGGCGGGCCTGGC GGGTGTGTTCTTTGCCAGTTATCAGGGTTTTGTAAACCCGTCGTCGTTCACCTTCTTTGAATCGGCGCTGATCCTCGCGATTGTGGTACTCGGGGGCATG GGGTCGACTGTCGGCGTGGTGATTGCCGCGTTTGTACTGACGGTCGCGCCCGAGCTGTTGCGCAGCTTTGCCGAATACCGCGTGCTGCTGTTCGGCGTGC TGATGGTCTTGATGATGATCTGGCGGCCACGGGGCCTGATTCGCATCAGCCGTGTCGGGGTCACACCACGCAAGGGAGTCGCGCCATGAGCGAGCGTTCC
DNA Sequence for Gene
>AA047_RS02285
ATGGATAAAGACGTCGTGCTCTCGGTGGACAAGCTGATGATGCACTTTGGCGGGATCAAGGCCCTGAGCGATGTTAGCCTCAAGGTCAAACGCAATTCGA TCTTCGCCCTGATCGGCCCTAACGGGGCCGGGAAAACCACCGTGTTCAACTGCCTGACCGGCTTTTATAAAGCCACCGGCGGCAGGATCGAACTCAACGC GCGGGGCACCCGCACCAATGTGATCAAACTGCTCGGCGAGCCGTTTCGGGTGACGGATTTTGTCTCGCCCAAAGCGTTCGGCAGCCGGCTGTATTACAAA ATGTTCGGCGGCACTCACCTGGTCAACCGCGCCGGTCTGGCACGAACCTTCCAGAACATTCGCCTGTTCAAGGAAATGTCCGTGCTGGAGAACCTGCTGG TGGCCCAGCACATGTGGGTCAATCGCAGCCTGCTGGCGGGGATTCTCAATACCAAGGGCTACCGCAAGGCTGAAAGCGACGCGCTGGACCACGCTTTCTA CTGGCTGGAGGTGGTGGATCTGGTGGACTGCGCCAACCGTCTGGCGGGCGAGTTGTCTTACGGCCAGCAACGGCGACTGGAGATTGCGCGGGCCATGTGT ACGCGGCCGCAAATTATCTGTCTTGACGAGCCGGCGGCGGGCCTCAACCCGCAGGAAACCGAAGCCCTGAGCGGCATGATTCGATTGTTGCGAGACGAGC ACGACCTGACCGTGGTGCTGATCGAGCACGACATGGGCATGGTCATGAGCATTTCCGACCACATCGTGGTCCTCGACCACGGCAACGTGATCGCTGAGGG CGGGCCTGACGCCATTCGCAACGACCCGAAAGTCATCGCCGCGTATCTGGGTGCAGACGAAGAGGAGCTGATATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGAGCACGATCCTCGAACTCAAGGAACTGGACGTTCATTACGGGCCGATTCAGGCGTTGAAAAAGGTCTCGATGCACATCGAAGAGGGCGAAACCGTCAG CTTGATTGGCTCTAACGGTGCCGGAAAATCCACCTTGTTGATGTCGATTTTTGGGCAGCCCCGCGCCAGTGGCGGTCAGATTCTTTATCAGGGTGTGGAT ATCACGCAAAAGTCTTCGCACTACATCGCTTCCAACGGGATTGCCCAATCGCCGGAGGGGCGTCGTGTGTTTCCGGACATGACGGTGGAGGAAAACCTGC TGATGGGCACCATCCCCATCGGTGACCAGCACGCCAAAGAAGACATGCAGCGCATGTTTGACCTGTTTCCGCGGCTCAAGGAGCGCCGTAATCAGCGGGC CATGACCATGTCCGGTGGTGAACAGCAGATGCTCGCCATTGCCCGTGCGTTGATGAGCCGCCCGAAGTTGCTGCTGCTGGACGAACCGAGCCTTGGGCTG
Amino Acid Sequence
>ABC transporter
MDKDVVLSVDKLMMHFGGIKALSDVSLKVKRNSIFALIGPNGAGKTTVFNCLTGFYKATGGRIELNARGTRTNVIKLLGEPFRVTDFVSPKAFGSRLYYK MFGGTHLVNRAGLARTFQNIRLFKEMSVLENLLVAQHMWVNRSLLAGILNTKGYRKAESDALDHAFYWLEVVDLVDCANRLAGELSYGQQRRLEIARAMC TRPQIICLDEPAAGLNPQETEALSGMIRLLRDEHDLTVVLIEHDMGMVMSISDHIVVLDHGNVIAEGGPDAIRNDPKVIAAYLGADEEELI
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site