Pseudomonas fluorescens AU11122, AA047_RS11690

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU11122 Contig_11, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAGCCGCGACCCGGCGGGCTTCAAGGGGCCAGCCCTGTTGCAGAACATTCTGGAAAGCGGCCTGCGCTTTGGCGAGATGGATATTTTCCACCGCCACGAA AGCATGGCCGGCAATGGCGAAGTGCTGTTTTCGATGGCCAACGCTGTGAAGCCGGGTGTATTCGATCTGGACGATATCGACCTGTTCAGTACGCCTGCCG TGAGCTTCTTCCTGGGGCTGCCGGGGCCGCGTCATCCCAAGCAGGCGTTTGATGTGATGGTGGCCGCGGCGCGCAAGCTGTCGCAGGAATTGAACGGCGA GCTCAAAGATGACCAGCGCAGCGTGTTGACGGCGCAAACCATCGAGCATTACCGCCAGCGCATCGTTGAATTTGAACGTCGCGCATTGACTCAAAAACGC TAAGCCCTGTGGGAGTCAGCCTGTTTGCTCCCACTCCAGCGCGAACGAATTAACTCAAGAGCAGCCTCGGCTGCTCTTTTGCATTGTGAGAGAACACCCC
DNA Sequence for Gene
>AA047_RS11690
ATGACCGCCGCCCATGACCGAATCCTAGCGCTGCGCGCTGAACTGGATCAGCACAACTATCGCTACCACGTGCTCGACGAGCCGAGCATCCCGGACGCCG AATACGATCGCCTGTTCCATGAGCTCAAAGCGCTGGAAGCCGAGCATCCCGAGTGGGTCACGCCGGACTCCCCGACCCAGCGGGTGGGCAGCGCTGCGTT GTCGGCCTTCACTCAGGTGCGCCATGAAGTGCCGATGCTGAGTTTGGGCAACGCCTTCGATGAGGCGGACATGCGCGAGTTCGACCGCCGGGTCAATGAA GGGCTGGATTTGCCCTCCGGCGACCTGTTTGGTGGTGGTGCCGAGGTCGAATACAGCTGTGAGCCCAAGCTGGATGGCCTCGCGGTCAGTCTGTTGTACC GGGACGGGCATTTGGTACGCGGTGCCACGCGAGGTGATGGCACCACGGGTGAAGACATCAGCATCAACGTGCGGACCGTGCGCAACATCCCGCTCAAGCT GCACGGCAGTGGCTGGCCCGCCGTGCTGGAGGTGCGGGGTGAGGTGTTTATGTCCAAGGCCGGGTTTGAGCGCCTGAACGAAACCCAAATGGCGGCTGGC GGAAAAACCTTCGCGAACCCGCGTAACGCGGCGGCGGGCAGCCTGCGGCAACTCGACTCGAAGATCACCGCCAGCCGTCCGCTGGAATTTTGCTGTTACG GCTTGGGCCAGGTGTCTGAAGAATTTGCTGACACGCACATCGGCAACCTCAAGCAGCTGCAAAAATGGGGCATGCCCATCAGCCATGAGCTGAAACTGGC CAAGGGCATTGCCCAGTGCCTGGATTATTACCGTGACATCGGTGAGCGGCGCGCTTCGCTACCGTATGAAATCGATGGCGTGGTGTTCAAGGTCAACAGC CTGGCCTCGCAGCGTGAGCTGGGGTTTCGTGCCCGCGAACCGCGTTGGGCCATCGCCCATAAATTCCCGGCGATGGAAGAGCTGACCGAGCTGCTGGATG TGGAGTTTCAGGTGGGCCGAACCGGCGCGGTGACCCCGGTGGCGCGTTTGAAACCGGTGAAGGTGGCGGGCGTGACGGTCTCCAACGCCACGTTGCACAA CATGGACGAAGTGGCGCGACTGGGGTTGATGATCGGCGATACCGTGATCATTCGCCGTGCTGGCGATGTAATTCCGCAGGTGGTGCAAGTGGTGCTGGAT CGCCGTCCGGACCATGCCCGGCCGGTGCACATTCCGCACAACTGCCCGGTGTGCGGCTCGCATGTCGAGCGCACGCAGCTGGTCAAGCGCAGCAAAGGCC GCGAAACGGTCACTGAAGGCGCGGTGTACCGTTGCGTCGGTCGTCTGGCCTGCGGTGCTCAGCTTAAGCAGGCGATCATTCATTTTGTCTCGCGCCGGGC GATGGATATTGAAGGGCTGGGCGAGAAAAGCGTTGAGCAGTTGGTGGACGAAGGTTTGGTGCGTTCGCCGGCAGATCTGTACATGTTGAACTTCGATCAG ATTGTCGAGCTGGAGGGTTTTGCCGAGTTGTCGACCAACAACCTGCTGGCCGCCATCGCTGACAGCAAGCGGCCGACACTGGCCCGTTTTATCTATGCCT TGGGCATTCCGGACGTGGGAGAGGAAACCGCCAAAGTGCTGGCGCGCTCGTTGGCTTCGCTGGAGCGTGTCCAGCAGGCGTTGCCGCAGGTGCTCACGTA CTTGCCGGATGTCGGTCTGGAAGTCGCCCATGAGATTCACAGCTTCTTCAGTGATGAACATAACCGGCAGGTGATTCAGCAGTTGCTGGAGCGCGGCCTT GAGTTGCAGGATCAGGGCGATCTGGGGGCTGAATTTGCCGCGAGCGCGACGTTGGGCGGCTTGATCGACAAACTGCATATCCCGTTTGTGGGGCCGGGCG GCGCGCAAAAGCTCGCCGACAAGTTTGGTTCGTTGCAAGGCGTGATCGATGCGGACTGGCTCGACATGCGCCAGGCCTTGCCGGAGAAGCAGGCCAAGGC GGTGCGAGCGTTTTTTGACAACCCCGACAATGCAAACCTTGCGCTGGCGATCGAGGCGCAGTTGCGAGATTTCGGCATGCACTGGCACAGCGAGAAAAAA GTCGTGGCCGGTTTGCCTCTGGCGGGGCAGACCTGGGTGCTGACCGGGTCGCTGGAACTGATGAGTCGCGATGTGGCCAAGGACAAGCTCGAAAGCCTCG GCGCCAAGGTCTCGGGTTCGGTCTCGGGCAAGACCCATTGCGTGGTGGCGGGACCGGGTGCGGGGTCCAAGCTGGTCAAGGCCAATGAGTTGGGGCTCAA GGTGCTGGATGAGCAGGCGTTTGTCGCCTTCCTGGCGCAGCAGGGCATCAGCCTCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATCTGTGCAGGCGCTGCCGGGCGGCGTCCGGCAGCGTAGCCGGGTCAAAAAAGCCGTGTTTGTCGCTCGAAGGGATTCGCGTGCTGCTGATTTCCCCCGC AGGACGCCCGACCCTAGCCTGAGATTCGCGGACGCTGCCCCGGTAATCCAAGTACTTGAGCCCATTCATTTTTTTATTCTTGAATAGGCGGTTGTAACTT TTCTTCAGACAGGTACAATGGCGCCGTTCGCTGCTAAGCGAATGTTGTTATGGTGACCCTATCGGTCCCTCCGCAACGATTACCCGTGAACCTGGTCAGA TCCGGAAGGAAGCAGCCACAGCGGGAACATTGTGTGCCGGGGTGTGGCTGGTGGGGTTGCCTCCATTTTGAATCCCCCTTTTTATATCTCCTCTCAACGC CGGTTACGACCTTGCGATTTTTTTGTGTGCGTGTTCGTTTTGTCGTCTTTTTTGCGCCCAGTCAGGTGTTGAATCACGCGATATGAAGAACAGTTAATGA
Amino Acid Sequence
>NAD-dependent DNA ligase LigA
MTAAHDRILALRAELDQHNYRYHVLDEPSIPDAEYDRLFHELKALEAEHPEWVTPDSPTQRVGSAALSAFTQVRHEVPMLSLGNAFDEADMREFDRRVNE GLDLPSGDLFGGGAEVEYSCEPKLDGLAVSLLYRDGHLVRGATRGDGTTGEDISINVRTVRNIPLKLHGSGWPAVLEVRGEVFMSKAGFERLNETQMAAG GKTFANPRNAAAGSLRQLDSKITASRPLEFCCYGLGQVSEEFADTHIGNLKQLQKWGMPISHELKLAKGIAQCLDYYRDIGERRASLPYEIDGVVFKVNS LASQRELGFRAREPRWAIAHKFPAMEELTELLDVEFQVGRTGAVTPVARLKPVKVAGVTVSNATLHNMDEVARLGLMIGDTVIIRRAGDVIPQVVQVVLD RRPDHARPVHIPHNCPVCGSHVERTQLVKRSKGRETVTEGAVYRCVGRLACGAQLKQAIIHFVSRRAMDIEGLGEKSVEQLVDEGLVRSPADLYMLNFDQ IVELEGFAELSTNNLLAAIADSKRPTLARFIYALGIPDVGEETAKVLARSLASLERVQQALPQVLTYLPDVGLEVAHEIHSFFSDEHNRQVIQQLLERGL ELQDQGDLGAEFAASATLGGLIDKLHIPFVGPGGAQKLADKFGSLQGVIDADWLDMRQALPEKQAKAVRAFFDNPDNANLALAIEAQLRDFGMHWHSEKK VVAGLPLAGQTWVLTGSLELMSRDVAKDKLESLGAKVSGSVSGKTHCVVAGPGAGSKLVKANELGLKVLDEQAFVAFLAQQGISL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site