Pseudomonas fluorescens AU11122, AA047_RS11245

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU11122 Contig_11, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGATTTCGCCCGCCAGCCCAAAGTGGCCGTCGCAGCGCGCAAGGCGCGGGTCGATCAGGCCATTACGGAAGTAGGCTTGCAACACGCAAGGGGGCAGTAC CCGGCGCAGTTGTCCGGCGGCATGGCGCAGCGGGTGGCGCTGGCCCGCTGCCTGGCGCGTCAGCCCCAAGTGCTGCTACTCGACGAACCGTTTGGCGCGC TGGACGAAGTCACCCGCGCCGACATGCAGCAGTTGTTGCTCAGCGTGATTGCGCGGCACAACACGGCGGCGCTATTGATTACCCACGATATTGACGAAGC CCTGCTGCTCAGCGACCGGATTCTGCTACTGGGCCACAGCCCGGCGCGGACCGTCGGTGAGTGGCGCATTGACCTTGCGCAACCGCGTGAAGACCGGGTC GATGAGCTGGGCGCTTTGCGCATCGACATTCTCAAAACCCTTCGGCGGGCGAGCCGCACCCCTGACCTTGAACCTTTACGCGACTCGCTGGAGCTAGCAC
DNA Sequence for Gene
>AA047_RS11245
ATGTGCCTGGACGACTTCACACACACTCGGCGTGACATTTTAAAACTCAGCGCCATGCTCACCGCGGCGGGCGCCTTGCCGATGCTCAGCAGCCTGCAGG CCCGTGCGGCGGCCGAGCCGGATGCGCCGGTGCGCATCGGTTACCTGCCGATCACCGACGCCACGCCGTTGCTGGTGGCGCACAACAATGGCCTGTTCGA GGCCGAGGGCATCAAGGCTGAGCGCCCTGTGTTGCTGCGCAGCTGGGCGCAGGTGATCGAAGCCTTTATCTCCGGGCAGGTCAACGTGATTCACTTGCTC TCGCCGATGACAGTGTGGGCGCGGTACGGCAGCAAAGTGCCCGCCAAAGTCGTGGCCTGGAATCACGTGGGCGGCTCCGGGCTGACCGTAGCCCCCGACA TCCAAGAAGTCCGGCAACTGGGCGGGCAATCCATCGCGATTCCGTTCTGGTACTCGATCCACAACGTGGTGGTGCAACAGCTGTTTCGCGACAACGGCTT GCAACCGGTCACACGCCCGGTAGGCAGCCCGCTGGCCGCCAATGAAGTGAACCTGGTGGTCATGCCGCCTTCCGACATGCCGCCCGCTTTGGCGACCAAG CGCATCGCCGGGTACATCGTGGCCGAGCCGTTCAATGCCTTGGCCGAAGACTTGAACGTCGGCCGCGTACAGCGTTTCACCGGCGACCTGTGGCGCAATC ACGCGTGCTGCGTGGTGTTCATGCACGAGCATGACCTGAACAACCGGCCTGAATGGTCGCAAAAAGTGGTCAACGCCATCGTCAAGGCGCAGCTCTGGAC CCGCGATAACCGACAGGCCGCCGCCCAGTTGCTGGCCAAGGACGGAGAAAACCGGTACACGCCGCACAGCAGTGCCGTGCTGCAAAAAGTCCTGGCGCCT GCCGCCAGCGATCGCGCGCGCTATGAAGCGGCGGGGGCGATTCAGCATGGCGACTGGGATGAACAGCGCATTGATTTTCAGCCTTATCCCTTTGCCAGCT ATACCGAAGAGCTGGTCACGCGGCTCAAGCACACGCTGATTCAGGGCGACAATCAGTTTTTGGCGGGCCTGGACCCCGCGCATGTGGCGACCGATCTGGT CGATGACCGCTTCGTCAAAAACAGCATCGCCGCCGTGGGCGGGCTCAAGGCATTCGGTTTGCCAGACAGCTTTGAACGCACCGAGGAGTTTGGCTTTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTGGCCCGGCACCTTCCACCGCGCGGCAATGGCTACTGGGTGGCGCAGGGCTGTTGAGCCTGTTGCTGGCCTGGTGGCTGGGTGTCGAGTGGCTGGGCAG TGAACAGGGGCTGGCGGCCCGCTTTTCGCCGCAAGCCACATTTGTCAGCCTGTACGAATTACTGGGCAGCGCCCAGTTGTACGAGAACGTTGGGGTGAGC CTAAAGCGCATCGTGGTCAGCCTGGTGATGGCGTTATTGATCGGCGTGCCATTAGGGCTGCTGATAGGCGGCTCGCGCAATCTGGAGGCCGCCACCACGC CCGCCTTTCAATTCCTGCGCATGATTTCGCCGCTGTCCTGGATGCCGGTGGTGGTGATGCTGATGGGCGTGGGCGATCAGCCCATCTACTTCTTGCTGAC CTTTGCCGCCGTGTGGCCGATTTTGCTCAATACCATTGCGGGGGTACGCCAACTGGACCCGCGCTGGCTGCAACTGAGCCGCAGCTTGAGTGCTACCCGT
Amino Acid Sequence
>ABC transporter substrate-binding protein
MCLDDFTHTRRDILKLSAMLTAAGALPMLSSLQARAAAEPDAPVRIGYLPITDATPLLVAHNNGLFEAEGIKAERPVLLRSWAQVIEAFISGQVNVIHLL SPMTVWARYGSKVPAKVVAWNHVGGSGLTVAPDIQEVRQLGGQSIAIPFWYSIHNVVVQQLFRDNGLQPVTRPVGSPLAANEVNLVVMPPSDMPPALATK RIAGYIVAEPFNALAEDLNVGRVQRFTGDLWRNHACCVVFMHEHDLNNRPEWSQKVVNAIVKAQLWTRDNRQAAAQLLAKDGENRYTPHSSAVLQKVLAP AASDRARYEAAGAIQHGDWDEQRIDFQPYPFASYTEELVTRLKHTLIQGDNQFLAGLDPAHVATDLVDDRFVKNSIAAVGGLKAFGLPDSFERTEEFGF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site