Pseudomonas fluorescens AU2390, AA041_RS01595
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU2390 Contig_86, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CACGTGTTGTCCGTTGCGCTGAGCAAGGCAGGCATCCAGGCCCGCAGTGCCGCGATGTCGATGCCAGACACACTGGTGATGTGTAAAACCATTCAAGTTG AAACCGGCCTGAACGAGCAGGACCTTGAACTGCACGTGCGCCTTGAAGCGGAACACTACGTCCCTTACAACCTCGATGACGCCGCGCTGGATTTCGAGGT GCTGGGGCCTTGCGCCGATGACCCGTACCGCACGAACGTGTTGCTGGTGGTGTGCCGCCAGCAAGCGCTTGAGTGGCATCAATCGGTACTGGTGCAGGCC GGCTTGCAGGCGAAGGTCATTGATGTGCGCGATCACGCCCATGCCCGGGGCCTGCACTGGTTGAGTGGGGTGCCCGGTTATCAGCCGGACAATCCGTTTG CCGGGGTGAAAATCCATCCCCGCCTCGCGCCCGAAGCACTCTTCTGCGATGCTGCGCAGCTGTTGACAGCCTGTGGTCTGGCCTTGAGGGGGTTCGATTG
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| DNA Sequence for Gene |
>AA041_RS01595
ATGGCGCGAATCAATTTGTTGCCATGGCGTGAGTGGCTGCGCGAAAAGCGCCGCAAAAGGTATGTGGGCATGTTGGTGGCGTTGCTGGTAGTCACGGCTG CGGGTTTGTTTGTGCTGGATCATTTTGTGGACCGCGCCGTGGAGCGGCAGTTGGCGCGTAATGACCTGATCAGGAGCGCCATGGTCCAGCTGGATGGGCG TGCGCAGCAGATCGATCAGCTGAAAGTACGTCGCGAGCAATTGCTGGAACGCATGCAAACCATCGAGACCCTGCAAGGCAATCGTTCGGGCAGCAGCATC GTGCTTGATCAATTGGCGCGCAGTTTGCCGGAAGGTGTGTATTTCACTGACGTGAAGATGGCCGAGCGCACCATTGCGATCACAGGGGTGGCGCAGTCCA CTGCACGGGTCGCCGAGTTGATGCGCAATCTCGACGCCTCCCATTGGCTTGAAGCCCCCACGTTGATTGAAGTGGGCGCCGAAGACGCCCAGGACGGCAG CCCTGCACGGTTATTTCACATGACCGTGCAGCAATCGCAAAACGGCCATGATGGCGGGCAGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGGTCGCGCAATGGCTGGAGAGCCTGCGTACGGTTGACCTGCATGAATTGAATCTCAAGCAGGCCGGGACGTGGTCAGGCAAGCGTAAAGCAGGTGTCGC GACAGGGTTTGTGGCGTTGCTGGTGCTGGCGGGTTATGCGCTCTGGTTGCAGCCCGGACTGGCCCGGCTTCATGAGCAACGCAGCGCCGAGCCCGTACTC AAAGCCCAACTGGCAAACCGTGCCCAACAGGCGGCGTCACTGGTTGACCACCACCAGCACCTTCAAGCATTACAAACGGCCTTCGACGAGGTGATGCGGC AACTACCGCGCCAGTCACAGGTGCCGGGGCTGCTGGACGAAGTGTCCCGGCTTGCCCAAAACAGCGGCCTGATCATCGAGCAGATCCAGTGGTTGCCTGA AACACTGCAACCCGCTTACAGCGAGCTCCCCCTGCAATTGAAGGTCGTGGGCGGGTATCACGACCTTGGGGTTTTTCTCGGTGGTATTGCGGGTTTGCCA
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| Amino Acid Sequence |
>pilus assembly protein PilN
MARINLLPWREWLREKRRKRYVGMLVALLVVTAAGLFVLDHFVDRAVERQLARNDLIRSAMVQLDGRAQQIDQLKVRREQLLERMQTIETLQGNRSGSSI VLDQLARSLPEGVYFTDVKMAERTIAITGVAQSTARVAELMRNLDASHWLEAPTLIEVGAEDAQDGSPARLFHMTVQQSQNGHDGGQF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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