Strain | Pseudomonas fluorescens strain AU2390 Contig_86, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GATGCCGACGGCAAAATGAACCTGTCACTGGCGGATATCGGCGGCGGTTTGCTGCTGGTGTCGCAGTTCACGCTGGCCGCCGACACCCAAAGTGGCCTGC GGCCGAGTTTCTCTACGGCTGCGCCACCGGCTCTGGCCGAATCGTTGTTTGACCACCTGTTGAGCGAGGCAAAACGGCTGCATCCGAACGTGGCAGCAGG CCGTTTTGGTGCCGATATGCAGGTGCATTTGGTCAATGATGGCCCCGTGACATTTTTGTTACAAACCTAAAACCCTGAAAAACCGTGATTTCGTCAGAAA ACAGGGTTTTTTAAGCACAAATACTTGCTGTCACTAGATGCGTTGTAACGCGGGCTACTAGATAATCGCGCGCTACACAGAGACTAATCCGGCGCGTTGG GGGAATCATTCATTCCTTTGAAGGTCGGAACAGTGCTCGCCAACCCGGCATTCAATCGCTGGCGGTTGGTTTCATCATCTGTATTCGGCGAGGTTTGCTC
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DNA Sequence for Gene |
>AA041_RS01440
GTGATTGTTAGTCCATTTAATGCACCAAAAAAGTCTGCCAAGCGGTTACGCAACGCACTGGTGACGGGCTCTGCGCTCTTTTGCTTGTTCGGTGCGGGTC AACTGTGGGCATTCAGTCTGGATGACGTGGCGGCGGAGGCTAAAACCCTCGCCGAGCAGAAGTACCAAGCTCCGCGCAGCAATCTGCCTAACGAATTTCG CGACATGAAGTTCGCGGACTACCAGAAAATTCGTTTCCGCAACGAGAAAGCGCAGTGGGCTGACGACAAAACGCCTTTCAAATTGTCGTTCTATCACCAG GGCATGCATTTCGACACGCCGGTGAAAATCAACGAAGTCACCGCCACCAAGGTGGAAGAGATCAAGTACGACGCCAGTCGTTTCGATTTCGGTGATGTGC AATTTGACCCGAAAGCCACCGAGAACCTCGGTTGGGCGGGCTTCCGCGTCCTTTATCCGCTGAACAAAGCCGATAAGCAGGACGAAGTCATGACCATGCT CGGCGCCAGTTATTTCCGCGTTGTCGGTAAGGACCAAACCTACGGCCTGTCGGCTCGTGGTCTGGCCATCGACACCGCTTTGCCGTCCGGCGAAGAATTC CCGCGTTTCACCGAGTTCTGGATTGAACGTCCGAAAGCCGGTGACAAGCATCTGGTGATTTTCGCCCTGCTGGATTCGCCCCGTGCTACCGGCGCTTACC GCTTCACGCTGCGCCCGGGTGTCGACACGGTGGTCGACGTCAAGGCGCAAATGTTCCTGCGTGACAAAGTCGGCAAGCTGGGCATAGCCCCGCTGACCAG CATGTACCTGTTCGGCGCCAACCAGCCGTCCAAAGTCCTCAACTACCGCCGCGAACTGCACGATTCGTCGGGCCTGGCGATTCACGCCGGCAACGGTGAG TGGATCTGGCGTCCGCTGAACAACCCCAAGCATTTGTCGGTGAGCAACTTCTCGGTTGAAAACCCGCTGGGCTTTGGCCTGTTGCAACGCGGCCGTGATT TCAGCCACTACGAAGACCTCGACGACAACTACCACAAGCGTCCAAGTGCCTGGATCGAGCCACAAGGCGACTGGGGCAAGGGGACGGTGGATCTGGTCGA AATCCCGACCGCTGACGAGACCAACGACAACATCGTTGCGTTCTGGAGCCCGGAAACTCAGCCTGAGCCGCTCAAGCCTTTCGACTTCGCCTATCGCCTG CACTGGACGATGGACGAAGCCGCCCTGCACCCTAAAGACAGCGCCTGGGCCCAGCAAACACTGCGCTCGACCGGTGACGTCAAGCAGTCCAACCTGATCC GTCAACCGGACGGCAGCGTGGCTTACCTGATCGACTTCGAAGGCCCGTCGCTTGAGAAGTTGCCAGCAGACGCCGCCGTGCGCAGCCAGGTCAGCGTGGG CGATAACGCCGAGCTGGTGGAAAACAACCTGCGCCACAACCCGGAAACCAAGGGCTGGCGTTTGACGTTGCGCTTGAAGGTCAAAGACCCGAGCAAGTCC ACCGAGCTGCGTGCCGCGCTGGTCGCCGATGAAGAACCGGCCCCTGCCGCCCCGCTGACCAAGGCCGAGAAAGCGGCGGCCAAGGCTCAGGAAAAGAAAG AACAGCACAAAGCCAAGGACGCCAAAGCGCCTGCGGCCGAAGCTGCCCCAGCCACACCAGCACCAGTCAAGACTGAAAAAGTCCTGACCGAGACCTGGAG CTACCAGTTGCCAGCCGATGAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGCTCACGCAGAGTCAGTCTCGCTCAGCGAGTACCTGGCGCACCTACCCTTGAGCGATGAGCAGCGCGTCGAGCTGGCCAGTTGCACATCGTTCGAGGCG TTGCACGAGCGCCTGTCGGCCCATCACGACGTGAGCACCGCCGAGGCCGCTCAGGCGTCGGTGGGCTCGCGCCTTAAACTCAGTTCGGCGCAAGCGCTGG AAGACGCCGAAATGCTCGGCGTCGATGCCAGCGGCCGAGTGATGCTCAAGGCCACGCCGCCGATTCGTCGCACCAAAGTGGTGCCCGAGCCGTGGCGCAC CAATATCCTGGTGCGTGGCTGGCGGCGCCTGACCGGACGCAGCAATCCGCCGGCACCGCCCAAAGATGAACGCGTGTTGCCCAAGGCGCGCTGGCGCACG GTGGGTTCGATCCGCCGTTACATCTTGCTGATTCTGATGCTCGGCCAGACCATCGTTGCCGGCTGGTACATGAAAGGCATCATGCCGTATCAGGGCTGGT
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Amino Acid Sequence |
>glucan biosynthesis protein G
MIVSPFNAPKKSAKRLRNALVTGSALFCLFGAGQLWAFSLDDVAAEAKTLAEQKYQAPRSNLPNEFRDMKFADYQKIRFRNEKAQWADDKTPFKLSFYHQ GMHFDTPVKINEVTATKVEEIKYDASRFDFGDVQFDPKATENLGWAGFRVLYPLNKADKQDEVMTMLGASYFRVVGKDQTYGLSARGLAIDTALPSGEEF PRFTEFWIERPKAGDKHLVIFALLDSPRATGAYRFTLRPGVDTVVDVKAQMFLRDKVGKLGIAPLTSMYLFGANQPSKVLNYRRELHDSSGLAIHAGNGE WIWRPLNNPKHLSVSNFSVENPLGFGLLQRGRDFSHYEDLDDNYHKRPSAWIEPQGDWGKGTVDLVEIPTADETNDNIVAFWSPETQPEPLKPFDFAYRL HWTMDEAALHPKDSAWAQQTLRSTGDVKQSNLIRQPDGSVAYLIDFEGPSLEKLPADAAVRSQVSVGDNAELVENNLRHNPETKGWRLTLRLKVKDPSKS TELRAALVADEEPAPAAPLTKAEKAAAKAQEKKEQHKAKDAKAPAAEAAPATPAPVKTEKVLTETWSYQLPADE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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