Strain | Pseudomonas fluorescens strain AU2390 Contig_80, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTGTTGTGGGTGTTGCTGATTTATTTCGGCAGCGTGAATGCCGTGCGCGCGCTGGGCGAGTTCCTCGGCATGCCCGACCTGACCCTCAGCGCGTTCGCGG CGGGTGTCATCGCGCTGGGCTTGTGCTTTGGCGCGTACGCCACTGAAGTGTTTCGCGGCGCCATTCTGGCCATCCCCAAAGGCCATCGCGAAGCGGGCCT GGCGCTGGGCCTGACCAAGCCACGGATTTTCACCCGGCTGGTATTGCCGCAAATGTGGCGGATCGCCCTGCCCGGTCTGGGCAACCTGTTCATGATCCTG ATGAAAGACACCGCGCTGGTGTCGGTGATCGGTCTGGAAGAAATCATGCGTCAGGCACAAAACGCCGTGACCTTCGCCAAACACCCGTTCACCTTCTACA TGGTGGCCGCCGTGATGTACCTGGGCCTGACCGTGCTGGCCATGGGCACCATGCATGTGCTTGAAAAACGCGCAGCGCGCGGCTTTGTGAGGAGAACGTA
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DNA Sequence for Gene |
>AA041_RS02655
ATGGTCTGGGAACTCTTCATCAAGTGGCTGCCCAAGCTGATTCAGGGCGCAACCCTGACCCTCGAACTGACCGCGCTGTCGGTGATCGCCGGCCTGATCG TCGCCATCCCGCTGGGCATCGCCCGTTCGTCTCGGCTGTGGTACGTGCGCTCGCTGCCGTATGCGTACATCTTCTTCTTCCGCGGCACGCCGCTGCTGAT CCAGTTGTTTCTGGTGTATTACGGCCTCGGGCAGTTTGAAGCGGTGCGCGACAGCGTGTTGTGGCCGTACCTGCGCAGCCCGTTCTGGTGCGCGGTCATC ACCATGACCCTGCACACGGCGGCGTACATTGCCGAGATCCTGCGGGGCGCCATTCAGGCCATCCCGCCGGGTGAAATCGAAGCCGCGCGGGCGCTGGGCA TGTCGCGCTTCAAGACCCTGATCCACATTGTGCTGCCGCGTGCTGCACGCATCGGCCTGCCCGCGTACAGCAATGAAGTGATCCTGATGCTCAAAGCCAG TTCGCTGGCGAGTACCGTGACCCTGCTGGAACTGACCGGCATGACCCGCACCATCATTGCCCGCACGTACCAGACGGTGGACATGTTCCTGATTGCCGGT GTCATCTATCTGGTCATGTCGTTTGTGCTGATTCAGGGCTTCAAGCTGCTGGAGCGCTGGTTGCGCGTCGATGCCTGCCAGGGCCGATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCCGACGTGTTGCGGGGAGCGTCATTGCTCACCCGCTTCCAGGCGCTGGACCGCTGGCTCAACCAGCATCAACACCTGTGGCGCCCGCGGCCATTCACG CAGTTGACTATGCCGTGGGAAGCGCAACACCCCGAACTGGCGCAGTGGTTGCGCCAGCGTTCGTTACAGGACGCCGAAGACAGCCACAACCAACCGCATC ATCTGCCCGCCCCTGCACCGTTTCCGGCGCTGGCGGCGATGTCGCGTGCCTTGAGCGCCGTGTCGGCCTTGCCGACGCAAGGGTTCATGCCGGCGCTACC GCGTTTGCAAGTCGACGTGCCGGGGCGTAAATGGCAGCAGATCGACGCCTTCGCTCAGTGCCTGACGTTTCAGACCCCGCCCACTCATTGGCTGGACTGG TGCGCGGGCAAAGGCCATTTGGGGCGTCGCCTGCTCAGCTCCGGGCAGCGATTGACGTGCCTGGAATACGACCCGGCGCTGATTGAATCCGGTCAATTGC
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Amino Acid Sequence |
>ABC transporter permease
MVWELFIKWLPKLIQGATLTLELTALSVIAGLIVAIPLGIARSSRLWYVRSLPYAYIFFFRGTPLLIQLFLVYYGLGQFEAVRDSVLWPYLRSPFWCAVI TMTLHTAAYIAEILRGAIQAIPPGEIEAARALGMSRFKTLIHIVLPRAARIGLPAYSNEVILMLKASSLASTVTLLELTGMTRTIIARTYQTVDMFLIAG VIYLVMSFVLIQGFKLLERWLRVDACQGR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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