Pseudomonas fluorescens AU2390, AA041_RS07730
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU2390 Contig_76, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAAGGCATGAAGCCGCGCTCGGCACTTGAACTCGAAGGCCGCGACATCTACATCGCCAACGGTTGTGTTCAGTGCCACTCGCAAATGATCCGCCCGTTCC GTGCTGAAACCGAACGTTACGGCCACTACTCGGTCGCCGGTGAAAGCGTCTGGGATCACCCGTTCCTGTGGGGTTCCAAGCGTACCGGTCCGGACCTGGC CCGCGTCGGCGGCCGTTACTCCGATGACTGGCAGCGTGCGCACTTGTACAACCCGCGCAACGTGGTGCCTGAATCGGTCATGCCCGCGTATCCGTTCCTC GTGGAACGCAAGCTGGACGGCAAGGACACCGCGAAAAAAATGGAAGTATTGCGCACGCTCGGCGTCCCTTACACCGACGAAGACATCGCCGGTGCCAAGG ATGCAGTGAAGGGCAAAACCGAAATGGACGCACTGGTGGCTTACCTCCAGGGCTTGGGCACCATCATCAAAAGCAAACGGTGATCTAGATGGATATCGGG
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| DNA Sequence for Gene |
>AA041_RS07730
ATGATTCGTGGCCTGGGCACTGTCGTCGTGATGGTGGCTTTTATCGGTTTGGCACTGTGGGTATTCAGCCCGCGGCGCAAGTCGGAGTTTGAAGACGCAA CCCTGTTGCCGTTCAAGGATGATCCCGAAGCCATCAAGCACGTCGAGCAAGAGCAAGCTTCTAGGAGTAACAAAGAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTACGTTCTGGAGTCTGTACGTTACAGTCCTCACTCTGGGTACCATCTTCGCCTTGACCTGGTTGTTGTTGGCCACCCGCAAGGGGCAACGCAGCGAACA GACTGACGAGACAGTTGGGCACTCTTACGACGGGATTGAAGAGTACGACAACCCGATGCCGAAATGGTGGTTCATGCTGTTTGTGGGCACCGTGATTTTT GCCTTGGGCTACCTGGTGTTGTATCCGGGCCTGGGTAACTGGAAAGGCTTGCTGCCGGGCTACCAGTACCTCGACCTACAAAAGGAAACGCCGTTTGCCA ATGGCCAGACGGGCTGGACCGGGGTTCACGAATGGGAAAAGGAAATGGCCAAGTCGGACGCCAAGTTTGGTCCGATCTTCGCCAAATTCGCTGCCATGCC CATTGAAGAAGTCGCTAAAGATCCGCAAGCACTGAAAATGGGCGGCCGTTTGTTTGCGTCCAACTGCTCGGTGTGCCACGGCTCCGACGCCAAGGGCGCG
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| Amino Acid Sequence |
>cytochrome oxidase
MIRGLGTVVVMVAFIGLALWVFSPRRKSEFEDATLLPFKDDPEAIKHVEQEQASRSNKE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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