Strain | Pseudomonas fluorescens strain AU2390 Contig_76, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGGCAGAAATCTTGCCTGCTAAGTCCACAGCTAAATGTGGAGAGCTTTTTAATGCAACTAAAAATTATGTCGATCTGGCGTCGATAGATTATGATCTTCG CTTGTATTTCGATTGCCTTGATGAGTTTTTGGCGGCCTGTAAAGTCAATGATCTTGTTGCAGTTAAGCGTTTGCGATTTAATATTTCTGGAATCAATGAT GCTATTGTCAACGGCTGGACACCATTGATTGTCGCTAGTTTTTTTGGTTCATTTGAAGTGGTGAGATACCTATTGAGTGAAGGTGCTGATCCCCAGAGGC CTAATATAAAGGGCACCACGCCTTTGATGTATGCGAAGGATGCGTTTTTTTCCGGGAGATGCTTTAAAACCTTTGGTTTATTAATGAGTGCTGGCGCTGA CCTAGTTCAGGTAGATTACTCAGGGAAGCAGTTGTATGACTATCTGACTTCTGCTCAGATTTGCGATTTGCAGAAATCACTTGGATAAGGACGGTGAAGC
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DNA Sequence for Gene |
>AA041_RS07505
ATGATTCCATTTCTTGATTTAAAAAAAATAAACTCAACTATGTCTTCTGAGCTGTTAGCGGCTTGTGCCAGAGTAATAGATTCTGGTTGGTATATTGGTG GTAGTGAACTTTCTTCCTTCGAAGCTGAGTTTGCTCATTATTGCGGAGCACAGCATTGCATCGGCGTTGCAAATGGTCTTGATGCATTGAGTTTGACTAT ACGAGCCTGGAAGGAGCTTGGTAAGCTATCAGAGGGAGATGAGGTTATAGTTCCATCAAATACGTATATCGCAAGTATTCTTGCTGTCAGTGAGAACGGT CTGGTGCCTGTGTTAACAGAGCCGGATGTTAATACGTATAATCTATGCCCTGAAAACACCAGGCAGGCAATAACGGCCAGGACCAAAGCCATTTTGCCCG TGCATTTATACGGGCATTTAGCTGATATGCCTGCTTTCATGCAGATAGCCGAAGAATACAATTTGCTTGTTCTTGAAGATTCCGCTCAAGCCCATGGGGC AAGTTTGCATGGAAAAAAGGCAGGTAGTTGGGGACATGCCTCAGGCTTCAGTTTCTACCCAGGGAAGAATTTGGGCGCTTTGGGGGATGCGGGTGCTATC ACTACAAATGATGATGCGTTAGCTGACACACTGAGAGCGCTTAGAAACTACGGATCTCAAGAAAAGTATAAAAACTTATACAAGGGTGTGAATAGCCGTC TGGATGAAATTCAGGCTGCGATGCTAAGTGTTAAGTTGAAGTACCTCGATGCCCAGACTGCACATAGACAACTCATCGCCTCTCTGTATCTGAATGAAAT TAAAAATCCGGAAATCAGTTTGCCTGGCGTGGACGTGTCGAACCAGGTTTGGCATCTATTCGTCATCAGGACTAAACACCGAGCAGCCCTGCAACACCAT TTGCAAGAACATGGCGTGCAAACGTTAATTCATTACCCGATAGCACCTCACAAGCAAGATGCTTATAAGGAGTTTGCGCACCTCCAACTGCCCGTGAGTG AACAACTGCACGCTGAAGTGTTAAGTTTACCTATTGGTCCTGAGTTAAGTTCCGAAGAAGCACGTCATATTGTGTCAGTCTGCAATAGCTTTAGCGTCAA ACATTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTATGACGCTAATCAAAACGAGTCTGCTCAATGCGATTGCAGTCATCATAAAAATGCTCACCTTGTTGGGGATCAATAAGGTGCTTGCCGTGTACGTTGG TCCTTCTGGATATGCAGCGATAGGGCAGTTTCAAAACGCTGTACAGATGATTACCGCTTTTTCCAGTGGGGCAATCAATACTGGCGTTACAAAATATACC GCCGAATACCAAGGCGATGTTGAGTTGACACGCCGGTTATGGAAAACGGCAGGCATGATTGTGATCTGTGCCTCTACTGCAGTCGCACTCTTGGTTGCCA TTTTTTGTGTTCCGCTTGCACGCTATTTTCTCAATGATGTGACGTTGTCTGGTGTATTTCTCTGGTTTGCAGCGACCTTGGTATTATTTACATTCAATGC CTTGCTACTCGCTATTCTTAATGGAAAAAAAGAAATCCATAGTTATGTATTGGCCAACATTGCAGGGAGTATATTTTCTTTAGCCGTAACCGTGTTAATG
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Amino Acid Sequence |
>aminotransferase
MIPFLDLKKINSTMSSELLAACARVIDSGWYIGGSELSSFEAEFAHYCGAQHCIGVANGLDALSLTIRAWKELGKLSEGDEVIVPSNTYIASILAVSENG LVPVLTEPDVNTYNLCPENTRQAITARTKAILPVHLYGHLADMPAFMQIAEEYNLLVLEDSAQAHGASLHGKKAGSWGHASGFSFYPGKNLGALGDAGAI TTNDDALADTLRALRNYGSQEKYKNLYKGVNSRLDEIQAAMLSVKLKYLDAQTAHRQLIASLYLNEIKNPEISLPGVDVSNQVWHLFVIRTKHRAALQHH LQEHGVQTLIHYPIAPHKQDAYKEFAHLQLPVSEQLHAEVLSLPIGPELSSEEARHIVSVCNSFSVKH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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