Pseudomonas fluorescens AU2390, AA041_RS22415

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU2390 Contig_51, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGGACCACACGCCAGCAACTTCCCCCGTCGCAACCGCATCATCAGCGGTTTATCCCTGGGGGTACTGGTCGTGGAAGCCAGCGTGGCCAGCGGCTCGCT GATAACGGCGCGGCTGGCGGCCGAACAGGGGCGAGAGGTGTACGCCCTGCCCGGGTCCATCCACCACCCCGGCGCGCGGGGCTGTCACCAATTGATCCGC GACGGGGCTACGCTGGTGGAAACCGTTGAGCACATTCTGGAAGGGCTGCGCGGCTGGCGCTCAATGCCGGTGTCCACCGGTGGATTGTTCACGCCAAGTT GTCATCCGCTCGTGCAATTGTTGCAGGCATCGCCCTACACCAGCGAAGGCCTGGCCCGTGCCAGCGGATGGGCATTGCCCACCCTGCTCGCCGCCCTGAC CGAGCTGGAGCTAGAAGGCCACGTGGTCCTGGAGGGCGGACGTTGGTTTGCTCGCGCCAGCTAAGTACACTTGCGCACAGCACATATCTGGAGACATTCA
DNA Sequence for Gene
>AA041_RS22415
ATGATCAGCACCTGGCGCGTACAGCAAGCCGCAACCGCCATTCGCGCGGGCGCGGTGATTGCCTATCCCACCGAAGCGGTCTGGGGTTTGGGTTGCGACC CATGGGATGAAGACGCGGTAGAACGGCTGCTGGCCATCAAGTCGCGGCCTGTGGATAAAGGCCTGATTTTGATTGCCGACAATATTCACCAATTCGACTT CCTGTTTGAGGACTTCCCCCAGGACTGGCTCGACCGCATGGCCAGCACTTGGCCGGGGCCGAACACCTGGCTGGTGCCGCACCAGGGCTTGTTGCCCGAG TGGATTACTGGCGTGCACGACACCGTGGCATTGCGCGTGAGCGATCACCCGTTGGTGCGCGAACTGTGTTCATTGGTGGGCCCGATCGTCTCGACGTCTG CCAACCCGGCGGGTTTGCCGGCTGCGCGGACGCGGCTGAAGGTGGAGCAATACTTCCGGGGGCAAATCGACCATGTGTTGGGCGGCAACCTGGGTGGGCG GAAAAACCCGAGCCTGATTCGCGATCTGGCGACGGGCAAAGTGGTTCGCCCGGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCAACGCGGGGCCGCTGTCGCAGGCCGAGAGGCCTTCGCCAGCGGCTGCCGGCGGGTTGAGATCAAGGCACCAGAATGGTCGAGCCGGTCGTGCGGCGTG CTGACAGTTCGGTCTGTGCCTTGGCGGCGTCTTTCAAGGCAAAGCGCTGGCTGATGTCCACCGTAATGTTGTCGCTGCGGATCATCTCGAACAGCTCGTC TGCCATTTTTTGCAGGTTCGCGGGGGTATTGGCATACGACGCCAATGTTGGCCGTGTGACATACAACGAGCCCTTCTGCGACAAAATCCCCAGATTCACA CCCGTCACGGCGCCCGATGCGTTGCCGAAGCTGACCATCAGCCCCCGCGGCGACAGGCAGTCCAGAGACGTCAGCCACGTATCTTTACCGACGCCGTCGT ACACCACCGGGCATTTCTTGCCGTCGGTCAGTTCCAGAACCCGCTGGACCACATCTTCGTGGCTGTAGTCGATGGTTGCCCACGCGCCCAGCTTTTTGGC
Amino Acid Sequence
>tRNA threonylcarbamoyladenosine biosynthesis protein RimN
MISTWRVQQAATAIRAGAVIAYPTEAVWGLGCDPWDEDAVERLLAIKSRPVDKGLILIADNIHQFDFLFEDFPQDWLDRMASTWPGPNTWLVPHQGLLPE WITGVHDTVALRVSDHPLVRELCSLVGPIVSTSANPAGLPAARTRLKVEQYFRGQIDHVLGGNLGGRKNPSLIRDLATGKVVRPA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site