Strain | Pseudomonas fluorescens strain AU2390 Contig_46, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TTTTCTGACGATCTTCATGGAACCAGGCGTTAACCAGCACGTCGTAACGACCGTTTTGTATCCCTTGCAACGCCCTGGCCCACGGCACTTGCTCAAAAGC GCTGGGGTACCCGGCCCGCGCAAGGGCTGTGCTGACCAGATCGGTGGCCAGCCCGCCATTGACCAGCGTGCCATCGGTAAACGGCGGCCAGTGATCGCCC ACCAGACGCAGCGTGTCGGCGCTGGCGTGATGAGCCCATAAGGTCAATCCGGACACAATCAAAGCTCTGCGCAAGCGAGACATGCAAGATCCTTAAGGGG CTGCCCACTATTATTTAGCTGCCATTTATTGGGGCCCATCCTGATCAGCGTCAAGGGATGAAGGCCCGGGCCACTTAAAGATAACTCCCAATCGCAGTAG GTTGATATCAAAAAGCCTTATCTGCTGACACTTTTACGCTTGGCCTGTTTTGCCATTCGCGCCTAGTATCTGGCGATCGCCACTCTTTCAGGACAACACC
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DNA Sequence for Gene |
>AA041_RS20760
GTGACCACTGACTGGATCTGTAAACACCACTCTGACCTGGGTAAAGAACAGCTGTACGCCATTTTGAAGCTGCGCTGCGAAGTGTTCATCGTTGAACAGG AATGCGCCTATCTGGACATCGACGGACAGGATCTGGAAGGTGACACGCTGCACCTGATGGGCTGGCAAAACGATCAACTGGTGGCGTATGCGCGCTTGCT CGACCCAGAGTCCCATGCCGGGGACGTGGTGATTGGCCGGGTGATTGTTGCACCGCAGGCACGTGGGCATAGCCTGGGCCATGATTTGATGGACCAAGCG CTGCATAACATCAAAGAAAACTGGCCGCAGGAGCCTGTCTTTCTGTCCGCCCAGGCGCACCTGCAATCGCTGTACGCCAAGCACGGTTTTAACGCCGTGG GCGAGCCCTACTTCGAAGACAACATCCCGCATATCGGCATGCGCCTGAACGTAGACGCTCAGGGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TTCAATACCTGCTTGATCTGCTCCACATGCAGGGCGACCCAACTTTTATCAATCGGGCCCCAACTGCGGATCACATAGCGCCCAGCGTGATTGCGGGCGC CGTCCTCTTGTTCGAATTCGCACAGGATGTCCAGGTCAGCGAGCGCTGCAAGGGTGTCCTGCGCCGTGCGACGGGGCATGCCGGTCACTTCGGTGAGCGC CGGCACATTACTGGCCCGTTGGGTATCAATCAACCAGGCCACATACAGGCGCCGGTAAAAGCTGCTTTTGGTTTTACTGACGTCCATTGATCACTCCTGT CACACGTTGGATTGCCGGTGGCGCGAACCTGTACGCTGCGCCGGTAAAGTCAGGTTTTGCCCTGCATGTCACGCCACGTCAGGTACACCCGCAAGTCGAA TTCCAGCTGGTGGTAGTCGGGCAGCATGTACTGGCACAGTTTGTAGAACGCTTTGTTGTGGTCCGATTCCTTCAAGTGGGCCAATTCGTGGACCACGATC
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Amino Acid Sequence |
>acyltransferase
MTTDWICKHHSDLGKEQLYAILKLRCEVFIVEQECAYLDIDGQDLEGDTLHLMGWQNDQLVAYARLLDPESHAGDVVIGRVIVAPQARGHSLGHDLMDQA LHNIKENWPQEPVFLSAQAHLQSLYAKHGFNAVGEPYFEDNIPHIGMRLNVDAQG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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