Pseudomonas fluorescens AU2390, AA041_RS20685

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU2390 Contig_46, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TACAACTGCACTTCGACGTGTTGCACCTGTTGCAGTTGATCGCGCTCGCGCAGCCCTTGCACGAACAACGCCGCCGCCCGCATCGGCCCTACGGTGTGGG AGCTGGAGGGGCCAATGCCAATCTTGAACAGGTCAAACACGCTGATAGCCATGTGCACAAACCTCGGGGATGAGTGCGCCCATCATCAGCCCTCTTGCGC CGCGCAAAACGTCCACCTGCGACCCACGGTTGCCCGCCAGCGCCTTCGCCGTTTTAAACGCGGGCGCGGCGCCAAAGACGCGGTTTACAGGCGATAAATT TCCAGATACGACCTCGCAGGCATCAGATACGACCCTCCCTGTACTGGATGCGACGCTCCCTGTAGGCGTTTGAATTTGACTGTTACATGATCGTTCTTGA CTCGATTGCACGATGCCCGGTCAGCCCGGCATTGCCCAACCGCAACTGATACGTACGGTTTCACGCTCGAAACCGCCCCACGAACGCCAGGAGTCGAACC
DNA Sequence for Gene
>AA041_RS20685
ATGAACCACACCCGATCAGTGTTGTTGGCTGCACTGTTGAGTCTGCCGGTCATCACCCACGCCGCCGAACCTGCGCAATGCGCCACGGTGAACTTCTCGG ATGTCGGCTGGACAGACATCACCGTCACCACCGCCGTCGCCAGCACGTTGCTGGACGCACTCGGTTACACGACTAAAACCACCATGATTTCGGTGCCGGT CACCTACAAGTCGCTGGCGGACGGTAAGAACATGGACGTGTTTTTGGGCAACTGGATGCCGACCATGGAGAACGACATCAAGCCGTATCGCGACGCCGGG ACGGTGGAGACCGTGCGCGCCAACCTGGAGAACGCCAAGTACACGCTTGCCGTCCCTGAAGCGCTCTACAACAAGGGCTTGAAGGACTTTGCCGACTTGC CGAAGTTCAAGCAGGAACTGGGCGCGAAGATCTATGGCATCGAGCCCGGCAATGACGGCAATCGCATGATCCAGACCATGATCGACAAGAACGCGTTCGG CTTGAAAGACGCCGGGTTCAAAGTGGTGGAATCCAGCGAGGCGGGGATGCTGTCGCAGGTCGACCGCGCGCAGCGCCGTGGCACTGACGTGGTGTTTCTG GGCTGGGAACCGCACCCGATGAACACCCGTTTCAAAATGAAATACCTCACCGGCGGTGACGATTTCTTTGGCCCCAATTATGGGCAGGCCACCATCTACA CCAATACCCGCAAGGGCTATTCCGAGGAGTGCAGCAACGTGGGTCAGTTGCTGAAAAACCTGGTGTTCAGCCTGGACATGGAAAGCACCTTGATGGGCGA GGTGCTGGATAACAAGATCAAGCCAAACGTGGCCGCCAAGGCGTGGCTCAAACAGAACCCGCAGGTGCTCGACACGTGGTTGGCGGGCGTGACAACGCTG GATGGCAAACCGGGTCTGGAGGCCGTGAAAGCCAGCCTTACGCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTGCGGGCGCCGGGCAACGGGTTTGCCGGGCGCCGTTTCCATTCCCCCTGCATGCGGACGTTCACTACCATGCTGATCGATCAAAAAATCCCTTTAGGCC AGTACATTGCGGGCTTTGTCGACTGGTTGACGCAACACGGCGCCAGCACGTTCGATGCCATCGCGACGTCGCTGGAAACGATGATCCACGGCGTGACGTT TGCGCTGACCTGGTTCAACCCTTTTGTCTTTATCGGGCTGATCGCCCTGCTGGCGCATGTCATCCAGCGCAAATGGGCGCTGACGGTGTTTGTGGCGCTG TCGTTTCTGCTGATCCTGAACCTGGGCTATTGGCAGGAGACCATGGAGACCCTGGCGCAGGTGCTGTTTGCCACGTTCGTGTGCGTGATTATCGGGGTGC CGCTGGGGATTCTCGCGGCGCACAAACCCATGTTCTACACTTTTATGCGACCGGTACTGGATCTGATGCAGACCGTTCCTACGTTCGTTTACTTGATCCC
Amino Acid Sequence
>glycine/betaine ABC transporter substrate-binding protein
MNHTRSVLLAALLSLPVITHAAEPAQCATVNFSDVGWTDITVTTAVASTLLDALGYTTKTTMISVPVTYKSLADGKNMDVFLGNWMPTMENDIKPYRDAG TVETVRANLENAKYTLAVPEALYNKGLKDFADLPKFKQELGAKIYGIEPGNDGNRMIQTMIDKNAFGLKDAGFKVVESSEAGMLSQVDRAQRRGTDVVFL GWEPHPMNTRFKMKYLTGGDDFFGPNYGQATIYTNTRKGYSEECSNVGQLLKNLVFSLDMESTLMGEVLDNKIKPNVAAKAWLKQNPQVLDTWLAGVTTL DGKPGLEAVKASLTQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site