Pseudomonas fluorescens AU2390, AA041_RS15150

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU2390 Contig_24, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCCAGTCGCCGATGTGCTGGTTTGGCGGCTATCAGGGTTTCCCGACCAAGGCCTTCGTCGGCAATTACTACCTGAGCGGCGACACCGTTGAGTTGAACCC GGATGGCAGCATCAGTTTTGTCGGGCGCAGCGATGATGTGATCACCACCTCCGGCTACCGCGTGGGCCCCTTTGATGTGGAGAGCGCCTTGATCGAACAC CCGGCGGTGATTGAAGCCGCCGTGGTCGGCAAGCCCGACCCGGAACGCACGGAGTTGGTCAAAGCCTTCGTGGTGCTGAGCCCGCATTACCTGGGCGATG CGCAATTGGCCGAAACCCTGCGCTTGCACGTGCGCCAGCGACTGGCGGCGCATGCCTATCCCCGTGAAATCGAATTTGTCAGCGAGTTGCCCAAAACACC CAGCGGCAAGCTGCAGCGCTTCATCTTGCGCAATCAGGAAATCGCCAAGGCTGAACAGGCGGCAAACGCCCGGGCCACGGCTTAACCTTCAGGAAAAATC
DNA Sequence for Gene
>AA041_RS15150
ATGCAGATCGAGAACAAGGTTTTTATCGTTACGGGCGCAGCTTCGGGCCTGGGTGCTGCAACGGCACAGATGCTGATCAATGCCGGCGCCAGGGTCATGC TGGTGGACGTGAACGCGGATGCCGTCGCCGCACAGGCCGCGCGTCTGGGTCCTCAGGCGCGCAGCGCGGTGGCGGACATCAGTCAGGCGCAGGCGGCGCA GGCGGCCATTGACGCCACGGTCGCGGCGTTTGGCGGCGTGAACGGTCTGGTCAACTGCGCGGGCATCGTGCGCGGCGAAAAGATCCTCGGCAAGGGCGGG CCTCACGGGCTGGAGAGTTTCAGTCAGGTGATCAACGTCAACCTGATCGGCAGTTTCAATATGCTGCGACTGGCCGCGGCGGCCATCGCGCAAACCGCTG CGGACCCCGATGGCGAACGCGGCGTCATCATCAACACCGCGTCGGTGGCCGCGTTTGACGGGCAGATTGGTCAAGCGGCGTACGCGGCGTCCAAAGGCGC GATTGCCAGCCTGACCTTACCCGCAGCCCGCGAGCTGGCGCGTTTCGGGATTCGGGTGATGACCATTGCCCCCGGCATTTTTGAAACCCCGATGATGGCG GGCATGACCCCTGAAGTGCGCGATTCCCTGGCGGCGGGCGTGCCGTTTCCGCCGCGCCTGGGCAAGCCGGCGGAGTATGCCGCGCTGGTGCGTCACATCA TTGAAAACAGCATGCTCAATGGCGAAGTGATCCGTCTCGACGGTGCCTTGCGCATGGCAGCCAAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGAGCGGGTGATGACGATGTCAAATGATCCGGTAGTGATTGTCAGTGTGGCACGGACCCCCATGGGCGGCTTTCAAGGTGACTTCAAGGGCCTGACCGCG CCACAACTGGGCGCTGCGGCGATTCGCGCCGCGGTGGAGCGCGCCGGGGTTTCGAGCGACAGCGTTGATGAAGTGCTGTTCGGTTGCGTGCTGTCGGCCG GTCTTGGACAGGCGCCTGCGCGGCAGGCTGCCTTGGGCGCGGGCCTGGACAAGGGAACCCGTTGCACCACGTTGAACAAAATGTGCGGGTCGGGCATGGA GGCGACGATGCTGGCCCATGATCGCCTGTTGGCGGGTGGGGCGGATGTGGTGGTCGCGGGCGGCATGGAAAGCATGTCCAACGCGCCGTATCTGCTTGAC CGGGCGCGCAGCGGCTACCGCATGGGCCATGGCCGTGTGCTGGATCACATGTTCCTCGACGGCCTGGAGGATGCCTACGACCGCGGCCGTTTGATGGGCA
Amino Acid Sequence
>3-hydroxy-2-methylbutyryl-CoA dehydrogenase
MQIENKVFIVTGAASGLGAATAQMLINAGARVMLVDVNADAVAAQAARLGPQARSAVADISQAQAAQAAIDATVAAFGGVNGLVNCAGIVRGEKILGKGG PHGLESFSQVINVNLIGSFNMLRLAAAAIAQTAADPDGERGVIINTASVAAFDGQIGQAAYAASKGAIASLTLPAARELARFGIRVMTIAPGIFETPMMA GMTPEVRDSLAAGVPFPPRLGKPAEYAALVRHIIENSMLNGEVIRLDGALRMAAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site