Pseudomonas fluorescens AU12644, AA054_RS12065

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU12644 Contig_63, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGACGCACCCGCCTGGCTTGACGATTTACAGCACAGTGGCATCCGTCACGAATGGAGCCCGACTATCATGAGCCGGTTGTGGCGCAAACTGGCGCTCAA CTGCGCAATCAACCCGTTGACCGTGCTGCATCAATGCACAAACGGAGGACTGAAGGCCCATACGCAAACAGTGGATGCGCTGTGCATCGAACTCAGCGCG CTGCTGGTAGGCTGCGCGCAGCCAGAAGCCGCTGTAAACCTGAGCGCTGAAGTGCACCGGGTGATTGATGCCACTGCCCAGAATTATTCCTCGATGTATC AGGATGTGGCGCAGCGCAGGCGCACAGAGATCAGCTATTTGTCCGGTTATGCCTGCCAGGCAGCGCAACGCATTGGCCTGGACACACCTCACTTGCACGC CATCCATCAGCAATTGATAGCCCACCTGACGCACCTCGGTTTGCCCTCTCACTGAGCGCCGCGCTAACCTGCCCGCTCACCCACTCCACACGGCCCCGTC
DNA Sequence for Gene
>AA054_RS12065
ATGCCCTTGCGCCAGCGTCTCGAAAACCTGCCGGTCGGCCAAAAGCTGCTGGCCGCCCTGCTTGTTTTGTTGGCAACCGTGTTGCTGGTGGCCAACCTGA CCTTCATCAGCGTGGCTTACTGGATATCCCACGAGAGCACCGCCCCGCAGGCATTGCAGACCCTGGGCAGCCTGGCAGCCAACCCCGGCCTGATGGAGCA TGCGCTGGATTCGCCCGAAAGCGCCAAGGCACTGCTCACAGAAATGGGCAGCTACGCTCCCCTGCGGGCCGGTGCCATTTATGACGCGTCCGGGCAATTG TTGGCACAGGTGCAGCACGGCGATCATCTGGCGTTGCCCGAACAGATTGGCCAGGTTCAAGCCTGGGGCCGGACTGAACTGCGCAGCCATCACACCTCCC GCCTTCCGAAGGGCGGGCACCTGTTGCTCGTGGCCAGCAGTGAACTGCCCATGGCGTTCTATACCGGCACGTTCACCGCCAGCCTCGGAATTCTGGTGTT CAGTGTATTGCTGTGGCTGTTGATCGCGCGCCAGATCAAGCGCCTGATCACCCAACCCATCTATCAACTCGAAGAGCTGTCCCGACAGGTCACACGCGAA GAGAACTATTCGTTACGGGCTAAACCGGGCAATAACGATGAAATCGGCAGCCTCGCGGAGGCGTTCAATACCATGCTCTCGCGCATCGAGGCGCGTGAGC AGGAACTCAAACGCGCCCGGGATGAAGCGGAGGCAGCCTACGATCAAGCCCAAGCGCTGGCAGAAGAAACCCGCCACGCCAATCGCAAGCTGGAACTTGA AGTACAGGTGAGAAGCAAGATCGAGAAAAAGCTCACCGGTTTTCAGATCTACCTCAACAGCATTATCGATTCGATGCCTTCTGCCCTGATCGCACTGGAC GAACAGCTCTACGTCACCCAGTGGAACCAGGAGGCCAGCGCCCTCTCCGGCACCCCTCTGGATGAAGCCTTGAATCAACCGGTGTACCTGGCGTTTGAAC CCCTCAAACCCTTTTTGCCACAAATCAAAGACACCATCGCCCATCACCGCGTGGTCAAGATCGAGCGCGTGACCTGGACCCAAGGTGAGGACACCAGGCA ATACGCGCTGACCTTCTATCCACTGATGGGCGGCGGCGGGCGCGGTGCTGTGATCCGCATCGATGACATCACCCAGCGTCTTTCCATGGAAGACATGATG GTTCAATCCGAGAAGATGCTCTCTGTGGGCGGTCTCGCCGCGGGGATGGCCCATGAGATCAATAATCCACTGGGTGCCATTTTGCATAACGTGCAGAACA TCCGGCGGCGCCTGTCCAACGACCTGCCCAAGAACATTGAGCACGCCGCGTTGACAGGCGTAGACCTCGATGCGATCAACCGCTACTTGCAGGCGCGCGA AATCCCGAAACTGCTGGATGGCATTCAACAGGCGGGGGCGCGTGCAGCCAAAATCGTGACCCACATGCTCAGCTTCAGTCGCCGCAGCAATCGCCAAATG AGCCCTTGCGACCTGTCAGCGCTGATCGATCAGGCGATCGATATCGCGAGCAATGACTTCGACCTCGCCATCGGTTTCGACTTCAAGGGCCAGGCCATCA CTCGTCAGTTCGACCCTCAACTTGGCCCGGTGCCCGGCATTCCCAACGAATTGGAACAGGTGCTGCTCAACTTGCTGAAAAACGCTGCGCAGGCGATTCA TCAGCGCCAGGACACCACCGAACCCGGCCGCATCATCCTGCGCACGAAGCTCAATCCACCCTGGGCAGAGATCCAGGTCGAAGACAACGGCGCAGGCATG CCTGAGAACGTGCGCAAACGTATTTTTGAACCCTTCTTCACCACCAAGGAAGTTGGCCAGGGCACGGGGCTGGGTCTTTCCGTGTCCTACTTCATCATTA CCAATAACCACAAAGGACAAATGGAAGTGCATTCAACCCCGGGCCAAGGCACGTGCTTTACGCTGCGTTTGCCATTGGCGCCCGTCCACGACTCTACCAA GCTGGAACTGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCATGGGCTTTCGCTTATCGAAGATTTACACCCGCACCGGCGACAAAGGCGAAACAGGTCTGGGGGATGGCCGTCGCGTGCCCAAAGATCATCCTCGGGT CGAGGCCATTGGAGAAGTGGACTCGCTAAACAGCCAACTGGGCCTGTTGCTGGCCGGTTTGCATGAGCAAAGGGTCGAGACACCGGGCCTTGAGGAACTG ATCGAGGTACTGACGCCCTGCCAGCATCGCCTGTTTGACCTGGGAGGCGAGCTGGCAATGCCTGCTTATCAGGCGCTCAAACTGAGCGAAGTCGAACGGC TTGAGGCGGCAATTGACCACTGGAACGAGACGCTTGGGCCATTGGAAAACTTCATATTGCCAGCAGGCTCTACCCTGATCGCCCAAGCCCATGTGTGCCG CTGCCTCGCGCGCAGTGCCGAGCGCCGCTGCCAGCACCTCAATGCCGTCGAGCCACTGAACGGCCCGGGGCTGGCCTACATCAACAGGTTGTCAGACCTG
Amino Acid Sequence
>histidine kinase
MPLRQRLENLPVGQKLLAALLVLLATVLLVANLTFISVAYWISHESTAPQALQTLGSLAANPGLMEHALDSPESAKALLTEMGSYAPLRAGAIYDASGQL LAQVQHGDHLALPEQIGQVQAWGRTELRSHHTSRLPKGGHLLLVASSELPMAFYTGTFTASLGILVFSVLLWLLIARQIKRLITQPIYQLEELSRQVTRE ENYSLRAKPGNNDEIGSLAEAFNTMLSRIEAREQELKRARDEAEAAYDQAQALAEETRHANRKLELEVQVRSKIEKKLTGFQIYLNSIIDSMPSALIALD EQLYVTQWNQEASALSGTPLDEALNQPVYLAFEPLKPFLPQIKDTIAHHRVVKIERVTWTQGEDTRQYALTFYPLMGGGGRGAVIRIDDITQRLSMEDMM VQSEKMLSVGGLAAGMAHEINNPLGAILHNVQNIRRRLSNDLPKNIEHAALTGVDLDAINRYLQAREIPKLLDGIQQAGARAAKIVTHMLSFSRRSNRQM SPCDLSALIDQAIDIASNDFDLAIGFDFKGQAITRQFDPQLGPVPGIPNELEQVLLNLLKNAAQAIHQRQDTTEPGRIILRTKLNPPWAEIQVEDNGAGM PENVRKRIFEPFFTTKEVGQGTGLGLSVSYFIITNNHKGQMEVHSTPGQGTCFTLRLPLAPVHDSTKLEL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site