Pseudomonas fluorescens AU12644, AA054_RS19310

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU12644 Contig_56, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCCACGGCCCTCGCCCTTTTTGAGCAATGTGCCGACCCGTTCCTTCATCTCGCGCGCCGCCTTGTTGGTAAAGGTCATGGCGACGATGTACTGGGCGCGG ATGCCACAGTTCTGGATCAAGTGCGCGATTTTGCGGGTAATCACGCTGGTTTTGCCCGAGCCCGCGCCGGCGAGCACCAAAAGAGGGCCGCCGACGTAGC TCACGGCTTCTTGCTGCCGGGGATTGAGTCGGGACATGACGAGTCAGGGGGTCGTATCTGAAAAGGGCGGGCATTTTAACAGGCTGAGCAAATATTGCTG CCACTCTGCGACAGTGTGACGTAACACTCTGTCTAAATTTGCTGCTTTTGTTACTTTCGCGCAGGATGCCGGGCGGATTTGAGGCTACCGTGAGAGGTGG ACCACAAATATGTATTTGATAACCAATGTCATTTGCCATTGGTCGTCGGCGCGTCATAATGCCCACCGCCTGAAATTACTGCAGAGTCTAGGGAGCCAGC
DNA Sequence for Gene
>AA054_RS19310
TTGTCTACGCCTGTCGAACCCTTGCGTTTGCTGCTATTGGCCGAAGAGCCTTCTTGGGCAGCGTTGTTGCGCGAGTGTCTGGCGCCCATAAAAACCGTTG CCGTTCTTGTGTGTGCGCCGAATTGGGAGTCGGTCAGTTATCTGTTCGAAAACGACCGCAATGCGTTGCTGCTCACCACCCCCGCGCTACAACCCGCACC GGGCCGTTGCCGGTTATCGACCATTCTGCTGCTGGAGGCTGAACCCGATGCCTCGCCGCAAGGCGTCAGCGACTGGTTCGTGGCGTCCAACCTGACGACC GATTTATTGCGCCGAAGCCTGCGGCATGTACGCGAGCGCGGCGTACTCGAACACACCTTGCAGCGCTTGGCCGAAGAAGACCCGCTGACCGGCATCGCCA ACCGCCAGGGCTTTCAGACCCTGCTGGCCGTGCGTCTGGCGGAAAGCGAAGGCCGCGGCATCGCCCTCGGGCATCTGGACCTGGACAACTTTCGCCACGC CAACGATGCCCTTGGGCACCAGGCGGGGGATCGCCTGATCCTGCAAGTGGTGGCCCGGCTCAAAAGCCAACTGGAGGCGGGCGATCAACTGGCCCGACTG GGCAGCGACGAATTCGCCTTGTTGATCGACACCCGCCGCGCCCCCGAACGCGCCGAGCAGATCGCTGAACGCATCACCGAAGCGCTGGCCGAACCTTACT GGATTGACGGCGAAAGCCTGTTGATCGGTTGCAGCCTCGGCATCGCCCATGCGCGCGCCAACGCCGGGGCCGATCCGCTGATGTGGCATGCGCACATCGC CATGCAGCAGGCCAAGAGCACGCAAGGCTGCACGTTTCACCTGTTCAATGAACGCATCAACCGCAACGCCCGCAGCCTGGCAGACCTCGAAAGCGAACTG CGCCGCGCCCTGCGCCGCGACGAGCTGGAGCTGCATTACCAGCCGCGCCTGGATTTGGGCACCGGGCAGATTGTCGGCCTTGAAGCCCTGGTGCGCTGGC GTCACGGCGAACGTGGCCTGCTGGCCCCCAGCGAGTTTGTGCCGCTGGCCGAACAAAGCGGGTTGATTGTGCCGCTGGGCTATTGGGTGATTTCCCGGGC GCTGCGCGACATGCAAGCCCTGCGCGAACACGGATTTGCGCCGCTGCACATGGCGGTCAACCTGTCGTTCCGGCAATTTCAGGACAGCCAGTTGCTCTCC ACCCTCAGCCGCTTGATTAGCGAGCGCGGGGTCGAGGCGCAATGGCTGGAATTCGAACTGACTGAAACCGCCGTGATGCGGCGCAGCGACCTGGTCAAGC AGACGATGGATGCGCTGGGGCGGCTGGGCGTGAGGTTTTCGCTGGACGACTTCGGAACGGGGTTTTCTTCTTTCGTGCACCTCAACAGCCTGCCGATCGC CTTGTTGAAAATCGACAAAAGTTTCGTCGGCGGCATGGAGAGTCGCGAAGAAAACCGCAAGCTGGTGCCCGCCATGATCAACCTGGCGCACAACCTCAAG CTGGAAGTGGTCGCCGAAGGGGTCGAAACCCCCGAGCAACTGGCCCTGCTGCGTAGCTTTGGCTGCGATCAGGTGCAGGGCTATTTCATCAGCAAGCCCT TGCCACTGACCGAACTGGTGGCCTTCTTGAGCCAGGCCATGGGCAAGCGCGAGGCGGCCTCGCGCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGGCGCGAGGCTCGGCTACGCCTACAGGCGGATCGCGGCGTTGTGCGCACGCCTGAGCATGCGCCGCATCTTCCACTCGAACGCCAGGGTCAGGCTGATA GCCGCACACGCGAGGCCCAGCGCCAGCCCCCACCACACACCCGCCGGGCCCCAATCGAAGGTGAACGCCAGCAACCAGGCCAGCGGCGCGCCAATGGCCC AGTAGCAGAACAGGCCGACGAGAAAGGTCGTGCGGGCGTCTTTCAGCCCGCGAATCGCGCCCATGGCGATGGTTTGCGCACCGTCGAACAGCTCAAACCA CGCCGCCACCGCCAGCAAGCTCATCGCCAGCTCGAACACCGGGCGGAACGCCAGATTGTCGTAGTCCAGCAACAGGCCGACCAGCTCCTTGGGCCAGAAC CAGAACACCACCGAAAAGCACAGCATGGTCGCCGCGCCAAAGCCGATCCCGACTCGCCCCGCCAGGCGTGCGCGCAACAAATCGCCACCGCCGTAATGCT
Amino Acid Sequence
>diguanylate cyclase
MSTPVEPLRLLLLAEEPSWAALLRECLAPIKTVAVLVCAPNWESVSYLFENDRNALLLTTPALQPAPGRCRLSTILLLEAEPDASPQGVSDWFVASNLTT DLLRRSLRHVRERGVLEHTLQRLAEEDPLTGIANRQGFQTLLAVRLAESEGRGIALGHLDLDNFRHANDALGHQAGDRLILQVVARLKSQLEAGDQLARL GSDEFALLIDTRRAPERAEQIAERITEALAEPYWIDGESLLIGCSLGIAHARANAGADPLMWHAHIAMQQAKSTQGCTFHLFNERINRNARSLADLESEL RRALRRDELELHYQPRLDLGTGQIVGLEALVRWRHGERGLLAPSEFVPLAEQSGLIVPLGYWVISRALRDMQALREHGFAPLHMAVNLSFRQFQDSQLLS TLSRLISERGVEAQWLEFELTETAVMRRSDLVKQTMDALGRLGVRFSLDDFGTGFSSFVHLNSLPIALLKIDKSFVGGMESREENRKLVPAMINLAHNLK LEVVAEGVETPEQLALLRSFGCDQVQGYFISKPLPLTELVAFLSQAMGKREAASR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site