Strain | Pseudomonas fluorescens strain AU12644 Contig_56, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCAAGTTGCTGCTGGCCGGGCAAGACCTGAGCCAGATCAGCAACGCGCAAATCCCGTTTTTACGGCGTCAGATCGGCGTGGTGTTCCAGAACCACCAGT TGCTGTTTGATCGCACCGTGTTCAATAACGTCGCCTTGCCGTTGCAAATTCAAGGGCTGTCCAAGGCCGAAATCGTCAAGCGCGTTGATTCGGCGCTGGA GCGGGTATCGCTCTCGGATAAAACCGACCTGTACCCCGGCGACTTGTCCACGGGCCAGCAACAACGCGTGGGTATTGCCCGCGCCATCGTGCATCGCCCA GCATTGCTCCTGGCCGATGAACCCACCGGCAACCTCGATCCGCGTCTGGCGGCGGAAATCATGGGCGTATTTGAAGACATCAACCGGTTGGGCACCAGCG TACTGATTGCCAGCCACGACCTGGCACTGATCGCCCGCATGCGTCATCGCATGTTGACCTTGCAGCGCGGGCGATTGATCGGCGACGGGGAGGCCGGGCA
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DNA Sequence for Gene |
>AA054_RS18225
ATGAGTGCAACACGCAGCCCCAAGGTATCGGAGCGCGTTGCGCCCAAGGCCGCTGAACCGCAGCCACCGAAGAAAAAGCACGATGAAGACGACGGCCCGA CGTTTGGCATGTTGTTTCACGCCTGGATCGACGCGCACCGCGCCAGTTTGCTCGACAGCCTGCGGCGTTTGGGCAAGCAGCCGATTGGCAGCTTTTTTAC CTGCCTGGTGATGGCCGTGGCGCTGAGCTTGCCCATGGGCTTGTCGTTGTTGCTTAACAACGTGGAACGCCTGGGAGGCTCGTGGCAGCGCGCAGCACAA ATTTCGGTGTACTTGCAGATGGACGCCACGGGCGATCAGGGCGAGCAACTGAGCAATCAGATAAAAGGTATGGCCGGTGTCGCGCAGGCTGAGTTCATCA GCCGCGAACAAGCCCTTGAAGAGTTCCAGCAGCAGTCAGGGCTGGGCGAAGCGCTCAAGGAGCTGCCGGACAACCCGTTGCCGGGCGTGGTCCTGGTGAC GCCGAATGAGGTAGATAAAGCCACCCTTGAGGCCCTTCGCGAGCGACTTTCCGAGTTGCCGAAAGTGCAACAGGCGCAACTTGATCTAGTCTGGGTTGAG CGTCTGGCGGCCATCCTCAAATTGGGTGACCGTTTTGTGTTCGGTTTGACGGTGCTGCTGGTCTCGGCCCTGTTGCTGGTGATCGGTAATACGATTCGGC TGCATATCGAGAACCGCAGAGTCGAGATTGAGGTCACCAAGCTGGTCGGCGGTACTGATAGCTATGTGCGTAGGCCGTTTCTATACATGGGCGCGCTTTA TGGCTTTGGTGCCGGTGTACTTTCGTGGGGCGTTCTGGCGTTCGGTCTGAACTGGCTCAATGACGCGGTTGTCGGGCTGGCCGGTCTGTATGGCAGCGAT TTTGCCCTCGCGGGCGTGCCTGTTGCCGACGGTCTGTCGCTCTTGCTTGGCGCGGTACTGTTAGGGTATATCGGTGCATGGATTGCGGTAGCACGGCATT TACGTGAGCTTTCACCCAAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TTTCATTTTTACCTGTTGACCTTTTCAGCTTATGTGGGAACTTTTTTTGTGGTTCCCGGTCAATTTTCGCAGTGCTGAACTGCACGAGTTATGTGAGTCG GAGGTTTTTCGTATGACCACTTCTTTGCAACCTGCGTATGCGTTGGTCCCTGGTGCGAACCTTGAGGCCTACGTAAACACCGTGAACAGCATTCCTCTGC TGACGCCGGAGCAGGAGCGTGAACTGGCCGAGAGTCTCTATTATGAGCAGGATCTTGAGGCGGCTCGGCAGATGGTGCTCGCCCACCTGCGTTTTGTCGT ACACATCGCTCGTAGTTATTCGGGCTATGGCCTGGCACAGGCCGACCTGATCCAGGAAGGCAATGTTGGCCTGATGAAAGCGGTCAAACGCTTCAACCCT GAAATGGGTGTGCGTCTGGTGTCGTTCGCTGTGCACTGGATCAAGGCTGAAATTCACGAGTTCATCCTGCGCAACTGGCGGATCGTGAAAGTGGCGACCA
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Amino Acid Sequence |
>cell division protein FtsX
MSATRSPKVSERVAPKAAEPQPPKKKHDEDDGPTFGMLFHAWIDAHRASLLDSLRRLGKQPIGSFFTCLVMAVALSLPMGLSLLLNNVERLGGSWQRAAQ ISVYLQMDATGDQGEQLSNQIKGMAGVAQAEFISREQALEEFQQQSGLGEALKELPDNPLPGVVLVTPNEVDKATLEALRERLSELPKVQQAQLDLVWVE RLAAILKLGDRFVFGLTVLLVSALLLVIGNTIRLHIENRRVEIEVTKLVGGTDSYVRRPFLYMGALYGFGAGVLSWGVLAFGLNWLNDAVVGLAGLYGSD FALAGVPVADGLSLLLGAVLLGYIGAWIAVARHLRELSPK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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