Pseudomonas fluorescens AU12644, AA054_RS10410

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU12644 Contig_53, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGAAAACCGCGTTTCAAATCGGCTTCATGATCTTCATTCCGTTCCTGATCATCGACCTGGTAGTGGCCAGTGTGCTGATGGCCATGGGCATGATGATGCT GTCGCCGCTGATTATTTCGTTGCCGTTCAAAATCATGCTGTTCGTGCTGGTCGATGGCTGGGCGCTGATTATCGGCACGCTGGCCAGCAGTTTTGGCGGG GTGTGACGCCATGCCCGGGAGTAATGCGCAATGACCCCAGAAGTCGCGGTTGACCTGTTTCGCAGTGCGTTGTGGCTGACCACCATGATGGTGGCCGTGC TGGTGGTGCCCAGCCTGCTGGTGGGCCTGATGGTCGCCATGTTCCAGGCGGCCACCCAAATCAACGAACAGACCCTGAGCTTCCTCCCGCGTTTGCTGGT GATGCTCGTGACCCTGATCGTGGCCGGGCCGTGGCTGGTGCAGACGTTCATGGAATACATCCTGTCGTTGTACGGCAGCATTCCGCAGTTGATCGGCTAA
DNA Sequence for Gene
>AA054_RS10410
ATGTCGCTGCTGGCCCTGACGGACGCGCAGATCAGTACCTGGGTCGCCAGCTTTATGCTGCCGCTGTTCCGGGTCGGCGCGCTGTTGACCACCATGCCGA TCATCGGCACGACCCTGGTGCCCAAGCGCATCAAGCTGTTTTTGTCGATCGCCATTACCCTGGCCATTGTGCCCAGTCTGCCGCCGCTGCCCACCGTCAA CCCGCTGGACCTGAGCGGGTTGATGCTGATTGCCGAGCAAATCATCATCGGCGCGTTGCTCGGGTTTTCACTGCAGCTGTTTTTCCAGGCGTTCGTGGTG GCCGGGCAAATCGTCGCGATCCAGATGGGCATGGGCTTCGCCTCCATGGTCGACCCGGCCAACGGGGTTAACGTGGCGGTGATCGGGCAGTTTTTCACCA TGCTGGTGACCTTGCTGTTCCTGTCCATGAACGGGCACCTGGTGGTGTTCGAAGTGCTCACCGAAAGCTTTACCACTTTGCCGGTCGGTGGCGGTTTATT GACCCTTCATTTTTGGGAAGTGGTGGGCAAACTGGGCTGGGTGTTGGGCGCGGCCCTGATGCTGGTGCTGCCGGCCATTACCGCGCTGCTGGTGGTCAAC ATTGCCTTCGGCGTCATGACCCGGGCGGCGCCGCAACTGAACATCTTCGCCATCGGCTTTCCGCTGACCCTGGTGCTGGGCATGGTGATCCTGTGGATCA GCCTGGCGGACATCCTCAATCAGTACCAACCGCTGGCCACTGAGGCCCTGCAGTTCTTACGTGATCTGGCACAGGCGAAATAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCATGGCCGAAAGCGAGAGTGGCGCCGATAAAACAGAAGACCCCACGGAGAAACGAAAAAAAGACTCCAGGGAAAAGGGCGAGATCGCACGCTCTAAAGA ACTGAATACGCTGGCCATCATGCTCGCCGGGTCCATCGGCCTGATCATCTTTGGCGGTGCGCTGGCGCAGGACATGATGGAAATCATGCGCTACAACTTC AGCATCAGCCGTGAAGCGCTGCTCAACCCCGATTCCATGGGCGCCTACTTGCTGCACTCGGGCAAAATCGCGCTGATCGCGCTCCAACCCGTGCTCATCA CCTTGCTGATTGCCGCTGTGATCGGGCCGATTGCACTGGGTGGCTGGCTGTTCGCGGCGGGCAGCCTGGCGCCCAAGTTCAGCCGCATGAACCCGGCGGC GGGGCTCAAGCGCATGTTCTCGGCCAAGGCGCTGGTCGAACTGCTCAAGGCGCTGGCCAAATTCTTCATCATCCTGATCGTGGCGTTGATGGTGCTCCAG
Amino Acid Sequence
>flagellar biosynthesis protein FliR
MSLLALTDAQISTWVASFMLPLFRVGALLTTMPIIGTTLVPKRIKLFLSIAITLAIVPSLPPLPTVNPLDLSGLMLIAEQIIIGALLGFSLQLFFQAFVV AGQIVAIQMGMGFASMVDPANGVNVAVIGQFFTMLVTLLFLSMNGHLVVFEVLTESFTTLPVGGGLLTLHFWEVVGKLGWVLGAALMLVLPAITALLVVN IAFGVMTRAAPQLNIFAIGFPLTLVLGMVILWISLADILNQYQPLATEALQFLRDLAQAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site