Pseudomonas fluorescens AU12644, AA054_RS09440

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU12644 Contig_53, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGCGATGCTGCCCGAAGGGTGGGTGATGTGGCTTAACCAGCCACGCAGCCTGTCGTTGGGCTTCTTTGAACTGCATTGGCCATCCTTTGAATTCATTGC CGGGTTCTGGGGATTGATGCTCTACACCGCGGCCTTTATTTGTGAAGAGTTTCGCGCCGGGGTCAGCTCGGTGCGCATTGAGCAACGAGCCGCCGGGCTG GCCCTGGGGTTTACCACTGCGCAGGTGTGGCGTTACATCGTATTTCCACAAGCGATTCGCACCGCACTGGGCCCGTTGCTGGGGCAATACATGAACGCCT TGAAAAACTCGTCGCTGACCATGGCCATCGGATTGGCCGAGTTGTCCTACGCGTCACGTCAGGTTGAAACCGAAACCTTCAAGACGTTTCAGGCCTTCGG CTTCGCCACCCTCTTGTATGTGGCCAGCATTGCGCTGATCGAAGTGATTGGCCAATGGATGGCCCGTAGCAAGTGGTACAAGCAGGGAGTGGTCTGAGCC
DNA Sequence for Gene
>AA054_RS09440
ATGGATTTTTCAGTGATTGGCGACAACCTGTCGTATTTCCTGCTCGGGGCTTATCCCGACGGTCCGCTGGGCGGCGCCGCACTCACGCTGGTGCTCAGTG TGTTGTCCGGTGTGATTTCCGCACTGTTGGGGCTGTTGCTCGGGATCGCGCTGGTGATGATGCGCGGGTGGGGCCGCTGGGTGTTACTGGCCGTGCTGGG GTTTCTGCGTGCCATTCCTGTGGTGATGCTGATTTTCTGGAGCTACTTTCTGCTGCCCGTCCTGTTCAAGGTGGACGTGCCCGCGCTAGCGACCGTGGTG TGTGCGCTGTCGTTGATCGGCGGCGCCTATCTGGCGCATTCGGTGCATGCCGGCATCAGCAGTTTGCCGCCCGGACAATGGGCGGCGGGCAAGGCGCTGG GTCTGAGCAGTGGGCAGGTGCTGCGCCTGATTATCTTGCCGCAAGCCCTGCCGATGATGCTGCCGTCTTTTCTTAACCAATGGATCTCGCTGATCAAGGA CACCACGTTGGCCTACGTGATCGGCGTGGGGGAACTGTCATTTGTGGCCACTCAGGTCAGTAATCGGGTGATGGTCCACCCGACTGAGATCTTCCTGTTT ATCGGGTTAGTTTACTTCGTGCTGTGCAGCAGCCTGGACTGGCTGGCCCAACGCTGGGTCAAGCCCGTCGTTCGCTCGCACGCCGCAGCGAAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGGGCCGTTGTCCACACTCACTCTTTAAAGATCAGGCATTTTGCGCCCCTCTCAAGCGAAATGAGCGGGGCGCATCACCCATTTCTGATATGCATGACCC GACTTTCTATCCCCTCTAAAAAATTTTCAAGCGGTAGCTTTTGATCTGCTGCAGTGGCACATTCCCGAGGAAAAATAGTTTCCAACCCTAAATACGCATT ATTTAGATAACTCAGCCCGTACTGAAAAGCCTCACTGTTCCAGACATCCACGGCTTTACCATAATGTTTAAACCCCGCCTTGATGCCTATGAAGCCATAT CGAGTGTAATCAATACCGTCTTTTACGTTGGAGACAGTTTGAAGTTGCGCGTGAAGTTTCCTCAGATTTTTGCCGCCTCCATTTGCGCGCAGTAATGAAC TGGTAGTTGACATCGGCCTTGATGCCGTAGGGACTTTGGCTCCAGACCAGGTTGATTGTCCAGCAGCCGCTTTTCCAACGCGGTTAATCGTTTTTTCCAG
Amino Acid Sequence
>ABC transporter permease
MDFSVIGDNLSYFLLGAYPDGPLGGAALTLVLSVLSGVISALLGLLLGIALVMMRGWGRWVLLAVLGFLRAIPVVMLIFWSYFLLPVLFKVDVPALATVV CALSLIGGAYLAHSVHAGISSLPPGQWAAGKALGLSSGQVLRLIILPQALPMMLPSFLNQWISLIKDTTLAYVIGVGELSFVATQVSNRVMVHPTEIFLF IGLVYFVLCSSLDWLAQRWVKPVVRSHAAAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site