Pseudomonas fluorescens AU12644, AA054_RS16285
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU12644 Contig_48, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCCACGGGCAAGGTCGAGCAATGGACGCCGCCTGCGCAGCAACACGCCACGGATGTTGTGCCGGTGCCGCGCATGGCCAACGGGCAAGGCACGTATTTG CAGGTCGGCGCCTTTGCCAACCCGGATGCCGCAGAGTTGCTTCGTTCCAAGCTCAGTGGCATGGTCAGTGCCCCCGTATTTATTAGCTCGATTGTGCGCA ATCAGCAGACCTTGCACCGTGTGCGGCTGGGGCCGATTGCCTCGGCCGGCGAAGTACAGCAAGCGCAAAACAGCGTGCGACTGGCCAATTTGGGCCAGCC AAGCGTTGTGACATCGGATCAGTAACACTGATTAACGCGTTGGGCCCCGAAGGTTCGGGGCCCAAACGCAGTTGCAGCGACAAAGAACAAAAGCCCTGCG AGGGCCGTGCCTGCAACTGAATACGCGACAGCCCCTCTAAGGGCTGTCAGAACAGTTTTGCCCGCGAGGGTAAGTTTCCATCAACAATTTCGAGAGACGG
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| DNA Sequence for Gene |
>AA054_RS16285
ATGAACATCACCACCTTTGCCAAACGCCTGTGCCTGCTTGTCCCGCTGATCATTACGCCTGCCGCCTGGGCAGCCGAAATGATGCCGTCGCCGCCACAGC TTGCCGCCAAATCCTACGTACTGATGGATGCCAGTAGCGGCAACGTGCTGGTTGAAAACAATGGCGACCAGCGCCTGCCCCCGGCCAGCCTGACCAAACT GATGACCGCGTACATTGCGACGCTGGAAATCCGTCGTGGCCAGATTGGCGAGAACGATCCGGTAACGGTCAGCGAGAACGCCTGGCGCACCGGTGGTTCG CGCATGTTCATCAAGGTCGGCACCCAGGTGTCGGTCAGCGATCTGCTGCACGGGATCATCATTCAGTCGGGCAACGACGCCAGCGTTGCATTGGCTGAGC ACATTGCCGGCAGTGAAGACGCTTTCGCGGATCTGATGAACAAGACCGCAGCCGAGCTGGGCATGACCAATAGTCACTTCATGAACCCGACCGGTCTGCC AAACCCTGATCACTACTCGTCGGCGCATGACATGTCGCTGCTGGCCCGCGCGATCATCCACGAAGACCCGACTCACTACGCGATCTACTCGCAGAAAGAG TTCTTCTGGAACGGCATCAAGCAGCCTAACCGCAACCTGTTGCTGTGGCGCGACAAGACCGTTGACGGCCTGAAAACCGGTCACACCGATGAAGCCGGCT ACTGCATGGTGTCTTCGGCAGTGCGTGACGGCATGCGTTTGATCGCCGTGGTGTTCGGCACCAACAGCGAAGCGGCCCGTGCGGCCGAAACGCAAAAACT GCTGACCTACGGTTTCCGCTTCTTCGAAACCCAGACCTTCTACCAGAAAGGCACCGAGCTGGCTCAGGCTCCTGTCTGGAAAGGCACCACCAGCCAAGTC AAAGCCGGTCTGGCCAACGACCTGACACTGACCCTGCCTAAAGGCCAATTGAAAAAGCTGGCCGCAAGCATGACCATGAACCCGCAACTGATGGCGCCCA TCGCCAAAGGTGACGTGATCGGTAAGGTTGAAGTCAAACTCGACGATAAAGTTGTTCACAGTGCGGACTTGATCGCACTTGAGCCGGTTGAGGAAGGTGG CATTTTCCGCCGCGTGTGGGATAGCATCCGTTTATTCTTCTACGGGTTGTTCAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTGCACCCACCTGTGTGACCCTGCGCTTACCCGGCGCGGGGTCATGTCTGTAGTTCCGGGCTTACGAGGCCAATACGCCATGAGCGATAACGAAGTAAAG GCGCCAAAGATCGAATTTCCTCAAACCGATTACCCGGTTAAGGTGATCAGTGACACAGGTGTGGGTAACAAGGACAAAATCCTCGTGATCGTGCGAAAAC ACGCAACGATCAACGACGAGCGTATTGACGAACGCCAGAGCACCAACGGCAAGTACACCACCATCCAGCTGCACATTGTGGCCACGGATCAGGACCAGCT GTACAACATCAACAGCGAACTGCGGGCCACTGGCTTCGTTCACATGGTGTTGTGATGTCGCGGGCCCTGGGTTTTCGCGAGTTGGCGTTGCTGGATTACG AGCCCACCTGGCTGGCCATGCAGCGTTTCACTGACCAACGCAAAGACCGGCCCGAGACGCAAGACGAGATCTGGCTGGTGGAGCATCCGCCAGTATTCAC
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| Amino Acid Sequence |
>D-alanyl-D-alanine carboxypeptidase
MNITTFAKRLCLLVPLIITPAAWAAEMMPSPPQLAAKSYVLMDASSGNVLVENNGDQRLPPASLTKLMTAYIATLEIRRGQIGENDPVTVSENAWRTGGS RMFIKVGTQVSVSDLLHGIIIQSGNDASVALAEHIAGSEDAFADLMNKTAAELGMTNSHFMNPTGLPNPDHYSSAHDMSLLARAIIHEDPTHYAIYSQKE FFWNGIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSSAVRDGMRLIAVVFGTNSEAARAAETQKLLTYGFRFFETQTFYQKGTELAQAPVWKGTTSQV KAGLANDLTLTLPKGQLKKLAASMTMNPQLMAPIAKGDVIGKVEVKLDDKVVHSADLIALEPVEEGGIFRRVWDSIRLFFYGLFN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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