Pseudomonas fluorescens AU12644, AA054_RS15440
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU12644 Contig_48, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCACTGCGTTGTTCGCCCGCTATGCCACACCTGCCTTGCAGGTCGTACACGGGTTTGGTGCCAGGCATGCGGCAGCCCTTTTTTGAGGTTCACGTCTTCA AAAGAGCGTGAAAAAAAACGGGTTTTCACAACTTCACAAGAGTGTGGCGAGCAAATGAAAAGTTTTGCGTCTGAACATGCACCATTAGCGTCTGTTACAG CCCCATCCAGCAGGTCTGAAGTCAGCTTTACCGCACACGACTAAAGCCTGTCCGCTTACGGATTTGGTTGCCCAAACGGACGCTCTTGACCTTAAGTCGA ATTGCCTCCCGCCCTGTGAAGTGCGTTCATATGAACCTTCAAGGCCCGGTTGGTGGCGTCCGCTGAAGCAGCAAGCAATTGCGATGAATCGGACATGGCG ATCCTGGCCACGCGTGACCCGAGGCTCCACCTGATCCACGCCTCGGACCACCTGGCAGCTATGCCGTCAATTTGGTGCCGTAGATTTTGGAGACGCGTTA
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| DNA Sequence for Gene |
>AA054_RS15440
ATGGCGCATAACGAAGCAGTCGACGTAGTACTGGTTGGAGCGGGCATCATGAGTGCCACCCTCGCCGTACTGCTCAAAGAGCTCGACCCCGGCATTTCGC TGGAAGTAGTAGAGCAAATGGACTCAGGTGCTGCGGAGAGTTCCAACCCGTGGAACAACGCAGGCACCGGCCATGCCGGGCTGTGTGAGTTGAACTACAC GCCCCAGGCGGCTGACGGTTCGATCGACATCAAAAAAGCTGTGCACATCAATGCGCAGTTCGAAGTCTCGAAACAGTTTTGGGCCCACCTGGCGCAACAG GGGACCTTCGGTTCCTGCAAGTCCTTCATTAGCCCGGTGCCTCACCTGAGCTTTGTGCAAGGCGAAAAAGGCGTGTCCTTCCTGAAAAAACGTTTTGACG TGCTGAGCCAGCACCATGCGTTTGCAGACATGGAATACACCGAAGACAAAGCCAAAATGGCCGAGTGGATGCCGCTGATGATGCCGGGCCGCCCGGCAGA TGAAGTCATTTCGGCAACCCGTGTGATGCACGGTACTGACGTCAACTTCGGCGCCTTGACCAAGCAGTTGCTCAAGCATCTGGCCAGCGCTGCGGACACG CAAATCAAGTACAGCCAAAAAGTCACTGGCCTCAAACGCAATGGCAGCGGCTGGACGGTGAGCGTCAAGGACATCAAAAGCGGCAACACGCGCCATATCG ATGCCAAGTTCGTGTTCCTGGGCGCAGGCGGTGCCGCCTTGCCATTGCTGCAAGCCTCGGGCATCGAAGAAAGCAAAGGGTACGGCGGCTTCCCGGTGAG CGGCCAATGGCTGCGTTGCGACAACCCGGAAGTGGTCAAGCAACACCAGGCCAAGGTGTATAGCCAGGCCGCAGTGGGCTCGCCGCCGATGTCGGTTCCT CACCTGGACACCCGTGTCGTGGACGGCAAAAAATCCCTGCTGTTCGGGCCTTATGCCGGCTTCACCACCAAGTTCCTCAAGCATGGCTCGCTCCTCGACC TGCCGATGTCGATTCGCCTGGGCAACATCGGACCAATGCTCGCCGTTGCGCGCGACAACATGGACCTGACCAAGTACCTGGTCAGCGAAGTGCGGCAATC GATGGAACAGCGCCTGGAATCCCTGCGCCGTTTCTATCCACAGGCCAAAGCCGAAGACTGGCGCCTTGAGATTGCGGGCCAGCGGGTTCAGATCATCAAG AAAGACCCGAAAAAAGGCGGTGTGCTGCAATTCGGTACCGAACTGGTCGCGGCCAAAGACGGTTCCCTGGCGGCACTGCTGGGTGCGTCACCGGGCGCAT CGGTGACGGTATCGATCATGCTGGACCTGATCGAACGTTGCTTCGCGCAAAAAGCCACGGGCGAATGGGCTGCCAAGCTCAAGGAAATTTTCCCGGCACG GGAAAAGGTGCTGGAAACAGACGCCGAGCTGTACCGTGAAATCAGCACCCGTAACTCCGAGTTGCTGGAGCTGGTGGCGCCGAACACCAGCATCGCGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCGACCTTCGGGTTTCAGCGTCACGCTTAAACCCTCACCCTTTTTGGGGTGAGGGTTTTTTATTGTTCGCGCGCCGGTGCCGGATCACGGCCCCATGGT GAACAGGACGTGCGTTCCGCCGTTCCTCACAAAGTCATCGTCGTCAGTCACGGGGATCAACTCCGCGCTACAGAGACTCAATACCTGCCCCGCCGAACGG GCATTGACCTGGCGGCTGCCGCGCGGAGGGTCCGGGGTGAGATGGCTAAAACTGAACACACACGCGCGCTCACCCTGGCGATAACTGAACGACTCATTGC CACGCGATTGCGGCAAATAGTAGGTCAACTCCTGACTGCCACCCGGCTCAATGACAAAGTCATGACCAGCATTGGCCGGGCTTTCCAACCACGAAAAATC CTTTCCGGGTGCAATCGCCGCAGAGGTCGCATTATGAATCTCGACCTCAAGCACCTCATCCAGGGCCATTGCCGGCGAGGCCATCACCCCCAGGCCCAAC
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| Amino Acid Sequence |
>malate:quinone oxidoreductase
MAHNEAVDVVLVGAGIMSATLAVLLKELDPGISLEVVEQMDSGAAESSNPWNNAGTGHAGLCELNYTPQAADGSIDIKKAVHINAQFEVSKQFWAHLAQQ GTFGSCKSFISPVPHLSFVQGEKGVSFLKKRFDVLSQHHAFADMEYTEDKAKMAEWMPLMMPGRPADEVISATRVMHGTDVNFGALTKQLLKHLASAADT QIKYSQKVTGLKRNGSGWTVSVKDIKSGNTRHIDAKFVFLGAGGAALPLLQASGIEESKGYGGFPVSGQWLRCDNPEVVKQHQAKVYSQAAVGSPPMSVP HLDTRVVDGKKSLLFGPYAGFTTKFLKHGSLLDLPMSIRLGNIGPMLAVARDNMDLTKYLVSEVRQSMEQRLESLRRFYPQAKAEDWRLEIAGQRVQIIK KDPKKGGVLQFGTELVAAKDGSLAALLGASPGASVTVSIMLDLIERCFAQKATGEWAAKLKEIFPAREKVLETDAELYREISTRNSELLELVAPNTSIA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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