Pseudomonas fluorescens AU12644, AA054_RS15400

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU12644 Contig_48, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCCCGGCCTGGCTGACGGACCTGTCTCGCACACCGGCCCATGCCCGAGCTGAAACCGTTGCGGAACAACCCATGTTCCGTGACGCCTTTCGCTTGCGTCG CTGCCTGCTGCCGGCCAATGGGTTTTATGAGTGGCGCGGCACCACGCGCAAACGGCCGTACTGGCTGACGCCCGGTGAAGGTGCATCACTGTTTTTTGCG GCGATTTGGGAGGCCTATCCGGTGCAAGGGCACGAATGGTTGAGCACGGCTGTTATTACTCAGGCAGCGGCCAGTCAGCGTCGCCCGTTGATTCTGGATG AGGCGGGTCAGCAAGCCTGGCTGGATCCTCAAACCCCTTTGCATGTGTTACAGGCGCTGCTGGCCAGCCAGCAATCACCGTTGCGCGAGCGCCCGCTGGC CAATCTGGTCAATGATCCCAAGCTTAATGCCCCCGAGTGTCTGACGCCGGGTTGAGGCGCGTGTCTGCTACGATGCGCGCCATCTTTATGGAGAGTCGTG
DNA Sequence for Gene
>AA054_RS15400
ATGGGTAAATTAGCGGTAGTGTGCGTGGTTGGCGCAGGGCTGTTGCTCGGCGGTTGTCAGTCGGTCAATACCACCAATGCCGGTGCGGTCGGCATTGAGC GCAAGCAGTACATGTTCAGCATGCTGTCGAGTCAGCAAGTGGATCAAATGTACGCCCAGTCGTACCAACAAACCGTCAGCGAAGCCAATACTAAAGGTGT TCTGGACAAAACCAGTACCAATGCAAAGCGCTTGCAAGCGATCGCCAACCGGCTGATTGCCCAGGTCCCGGCCTTTCGCCCGGATGCGGCGCAATGGAAT TGGGAAGTGAACCTGATCAAAAGTGATGAGCTCAATGCCAGCTGCGGGCCGGGCGGCAAGATCATTTTCTATAACGGGATCATTGATCAGCTCAAACTCA ACGACGATGAAATCGCTGCGGTCATGGGCCATGAGATTGCCCATGCATTGCGCGAACATGGCCGCGAGTCGATGTCCAAAGCGTACGGCATCGAAATGGC CAAGCAGGGTGCGGGTGCATTGCTGGGGCTGGGGCAGGACAGCCTGCAACTGGCCGATACCGTGGTCAATTACAGCCTGACGTTGCCTAACAGCCGCAGT AACGAAAACGAAGCAGACCTGATTGGTCTGGAGCTGGCGGCGCGTGCGGGCTACAACCCGAATGCCGCCATCACCTTGTGGCAGAAAATGGCGCAAGCGT CGCAAAGTGCGCCGCCTGAATTCATGAGCACCCACCCGGCGTCGAGTAGCCGGATTGCCGCGTTAGAAGCGGCGATTCCCAAGGTGTTGCCGCTGTATCA GCAAGCGCCAAAAACCCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCTTGACGTTGCCGGCCCTTTCCCGAAGAAGAGGGCCGGTGATGGGGGCTACACCCAGCCGCTGATCGCCATCGCCTTGTACACTGCCACCGCGGCCAG TACGAAGAAGGCGGTCGCCGCCAACCGGCGAATCAGGGTCAGCGGCAACTTGTCGGCCGCAAAGTTACCTGCCAGCACCACCGGCACGTTGGCAATCAAC ATGCCCAGGGTTGTGCCGATAATCACCAGCCACAGATCCGGGTATTGAGCGGCCAGCATTACGGTCGCCACTTGGGTCTTATCGCCGATTTCAGCGATGA AAAACGCAATCAGTGTGGTCAGGAACGGGCCAAATTTGCGGGCCGTGCTCGCTTCGTCATCGTCCATTTTGTCCGGCACCAGCGTCCACAGTGCGGTGGC CGCAAAGCTGGCTGCGAGGATCCAGTGCAAGGTCACATCCGAGAAGAAACTGCCGAACCAGGCACCTACCGCACCTGCGGCGGCGTGGTTGGCCAGGGTC
Amino Acid Sequence
>peptidase M48
MGKLAVVCVVGAGLLLGGCQSVNTTNAGAVGIERKQYMFSMLSSQQVDQMYAQSYQQTVSEANTKGVLDKTSTNAKRLQAIANRLIAQVPAFRPDAAQWN WEVNLIKSDELNASCGPGGKIIFYNGIIDQLKLNDDEIAAVMGHEIAHALREHGRESMSKAYGIEMAKQGAGALLGLGQDSLQLADTVVNYSLTLPNSRS NENEADLIGLELAARAGYNPNAAITLWQKMAQASQSAPPEFMSTHPASSSRIAALEAAIPKVLPLYQQAPKTQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site