Pseudomonas fluorescens AU12644, AA054_RS20190

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU12644 Contig_4, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AAACGCTATGTGGCCGAAGGGTTGGCACTGATCGGCGATGCCGCCCACACCATCCACCCGTTGGCCGGGCAGGGCGTCAACCTCGGTTTCCTTGATGCGG CGGTGTTGGCCCACGTGTTGTTGCACGCGGTTGATCGCGGCGAACGTCTGGCCGACATCAAAGTACTAAGCCGTTTCGAGCGTCGTCGCATGCCGCACAA CCTGGCGTTGATGGCGGCGATGGAAGGCTTTCAGCGACTGTTTCAGGCGGATTCGCTCACCGCGCGCTTGCTGCGCAACAGCGGCCTGAAGTGGGTCAAC CAAATGCCCGAGGCCAAAGCGGTGTTCGTGCGTCAGGCGCTGGGGTTGACCGGGGATCTGCCGCCGCTGGCCAAGCCCTGATCGGAGCCTGCCCCGGCCT TTGCAACATCTGGTAACGCCTCGGGGGCGAGTTAGGTTGAGCTGGAAAATGTGATTCACTACCATTTACGCCCGATTCGCATCTAGAGAGACCGCCCCCC
DNA Sequence for Gene
>AA054_RS20190
ATGTTGGCACCCAAGCGTCTACTGACTGCCCTGGCCCTGAGCGTTTTTGCGAGCAGCGTCTACGCTGCCGACGAAGTGGTGGTGTATTCCTCGCGCATCG ACGAACTGATCAAGCCGGTATTTGACGCCTACACCGCGAAAACCGGGGTCAAGGTCAAGTTCATCACAGACAAGGAAGCGCCGCTGATGCAGCGCATCAA GGCAGAAGGCCAAAATGCGACTGCCGACCTGTTGTTGACCGTGGACGCGGGCAACCTGTGGCAAGCCGAGCAAATGGGCATCCTGCAGCCGTTCACGTCC GAAGTGATCGATAAAAACATCCCGCCGCAATACCGCTCTTCTTCCCACGCGTGGACGGGCCTGAGCCTGCGTGCGCGGACCATCGCCTACTCCACGGACC GGGTCAAACCTGAAGAGCTGTCCACCTACGAAGCGCTGGCCAATAAAGAGTGGGAAGGCCGCCTGTGCCTGCGCACCGCCAAAAAGGTGTACAACCAGTC GCTGACCGCCACCATGATCGAAGTGAACGGTGCCGACAAAACCGAAGAGATCCTCAAAGGCTGGGTGAACAACCTGTCCACTGATGTGTTCTCGGATGAC ATCGCGGTGCTGGAGGCGATCAACGCCGGTCAGTGCGATGTGGGCATCGTCAATACCTACTACTACGGCCGCCTGCACAAGCAGAAGCCTGACCTGGCCG TGAAGTTGTTTTGGCCCAATCAGGCTGATCGCGGTGTACACGTCAACCTGTCGGGTATTGGTTTGACCCAATACGCTCCGCACCCGCAAGCCGCCAAGGC GCTGGTCGAGTGGATGACCACGCCGCAGGCGCAGTCGATCTTTGCAGGCACCAATCAGGAGTTCCCGGCGAACCCGAGCGTTCCGCCTTCTGCCGAAGTG GCCAGTTGGGGTGAGTTCAAGGCAGACGCCTTGCCAGTCGAAGTGGCCGGCAAACGCCAGGCTGAAGCCATCCGCATGATGGACCGCGCGGGCTGGAATT AA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCCGGTGTAAAGCCAGCCCTCTCCCTCGCGCAGAGGGCGCTGACGGGCGGTCTGTTCGAAGGCGCGCGGTCTCTATTCGGGCCGCGCGCAGCCTTCCCC CTCCACATCGTGTAACAACGCAACATACAATCGCTGGTTCTTCCCTCCTTCCGAGAGTCTTTTGTGGCACATCCCGCCCAACGTCGCTGGTATCCGCTGG TTTTTAGCATCGCTGCCCTGGTGCTTTTGCCCCTGAGCGTTTTGCTGTTGTCCTGGCAAAGCGTGGACAGCCAGATCTGGAACCACCTGTGGGACACACA AATGCCGCGTCTGCTGGGCAACACGCTGACGCTGATCATCGGGGTCGGGATCGGCGTCACCCTGCTGGGCGTCAGCCTTGCGTGGCTGACCAGCTTGTGC GAATTCCCCGGCAGACGCTGGCTCGACTGGGCGCTGATGTTACCGTTCGCGATCCCGGCCTACGTGCTGGCGTTTGTGTTCGTCGGGTTGCTGGACTTCG
Amino Acid Sequence
>iron ABC transporter substrate-binding protein
MLAPKRLLTALALSVFASSVYAADEVVVYSSRIDELIKPVFDAYTAKTGVKVKFITDKEAPLMQRIKAEGQNATADLLLTVDAGNLWQAEQMGILQPFTS EVIDKNIPPQYRSSSHAWTGLSLRARTIAYSTDRVKPEELSTYEALANKEWEGRLCLRTAKKVYNQSLTATMIEVNGADKTEEILKGWVNNLSTDVFSDD IAVLEAINAGQCDVGIVNTYYYGRLHKQKPDLAVKLFWPNQADRGVHVNLSGIGLTQYAPHPQAAKALVEWMTTPQAQSIFAGTNQEFPANPSVPPSAEV ASWGEFKADALPVEVAGKRQAEAIRMMDRAGWN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site