Pseudomonas fluorescens AU12644, AA054_RS08375
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU12644 Contig_32, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATGCCGAGTCGCGAGCACAGGCATTGCACCGCCATGCCCGCGAGGCTGGCCAGCAACACGACGAATAACAGGTTATAGCCGTAGCGCGACCCGGCTTCGA TGGCGGTGGCCCAGTTGCCGGGGTCCATGTAGCCAATACTGATCAGCAGGCCCGGCCCGGCAAAACGCAAGGCGCGTTTCCAGAACGGTGCGCGGGGGTC CACCGCTACGCTGCCGCTGACTTCAGGCGGGCAGAAGGGCGCCGTGGGGATTTTCGGCAGGCTGAATGTCAAGTGCAGGCTCCGGTTGTTTTTGTGCGGG AGGCGGGCAGGGGCTATGGGTGTGAGGTTACATCGGTCGTGGGGTTTTTTCCGCCGATAGGGTCGATACAGCCGGGCTATTGCTGTTTTTACAGTCACGG GGGCAGCGATCTGTCTCGACGGTCAGTCCTGAGCTGGAGCCAAGCGGGGTCGGCCTGTTACCATTCGGCCCTTTGTTTTATCTCCACTTCGAGACCGCCC
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| DNA Sequence for Gene |
>AA054_RS08375
ATGACCACCGTTCGCACGCGCATTGCGCCATCGCCTACCGGCGACCCCCACGTCGGCACCGCTTACATCGCTTTGTTCAACTACTGCTTCGCCAAGCAGC ATGGCGGCGAGTTCATCCTGCGGATCGAAGACACCGACCAATTGCGTTCGACCCGTGAGTCCGAACAGCAGATTTACGATGCCCTGCGCTGGCTCGGCAT CACCTGGAGCGAAGGGCCCGACGTTGGCGGCCCGCATGGCCCGTATCGTCAGAGCGAGCGCAGCGATATTTATAAGCAGTACACCCAGCAACTGGTCGAC ATGGGGCATGCGTTCCCTTGTTTCTGCACCGCAGAAGAGCTGGACCAGATGCGCGCCGAGCAAATGGCCAAGGGCGAGACCCCGCGCTACGACGGTCGCG CGCTGTTGCTGTCCAAGGAAGAAGTGGCCCGGCGCCTGGCCGCTGGCGAGCCGCACGTGATCCGCATGAAAGTGCCAACCGAAGGCGTGTGCGTGGTGCC AGACCTGCTGCGCGGCGACGTCGAGATCCCGTGGGACCGCATGGACATGCAAGTGCTGATGAAGACCGACGGCCTGCCGACGTACTTCCTGGCCAACGTG GTCGACGATCATTTGATGGGCATTACCCACGTATTGCGCGGTGAAGAATGGTTGCCGTCGGCGCCGAAACTGATCCTGCTCTACGAGTACTTTGGCTGGG AACAACCGCAGTTGTGCTACATGCCACTGCTGCGTAACCCGGACAAGAGCAAGCTGTCCAAGCGCAAGAACCCGACCTCGGTTACGTTCTACGAGCGCAT GGGCTTCATGCCCGAAGCGATGCTCAACTACTTGGGTCGCATGGGTTGGTCGATGCCTGACGAGCGCGAGAAGTTCTCGCTGCAAGAGATGGTCGACAAC TTTGACCTGTCCCGCGTTTCGCTGGGCGGTCCGATTTTCGATATTGAAAAACTCTCCTGGCTCAATGGCCAATGGTTGCGTGACTTGCCGCTGGACCAAT TTGCCAGCCGTGTCCAGCAATGGGCGCTGAACCCCGAGTACATGATGAAGATCGCGCCGCTGGTACAGGGGCGGGTCGAGACGTTCAGTCAGATCGCGCC GCTGGCCGGGTTCTTCTTCTCGGGTGGCTTGCAACTGGATGCCAAGCTGTTTGAGCACAAAAAGTTGTCCGGCGATCAAGTGCGTCAACTGATGCAACTG ATCCTGTGGAAGCTCGAAAGCCTGCGTCAGTGGGAAAAAGACGCCATCACCGGTTGCATACAAACGGTGGTGGATGCCCTTGAGCTGAAGCTGCGCGATG CGATGCCGCTGATGTTTGCGTCGATTACGGGGCAGGCCAGCTCGGTGTCGGTGCTGGACGCCATGGAGATTCTGGGCCCGGACCTCACGCGTTTCCGCTT GCGTCAGGCGCTGGAGCTGCTGGGCGGTGTCTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTCAACGCAATCGGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGGTTTTGAGGTGCCGTCGCTGCCGCAGGCTGGGGTCAGGACCGCTGCGCGGCCCTTTTAGGCCTTTGGCAGCGACGGCACGTTTTGTATGCGGGGCCC GTATTTACGGGGTGGGAAGGGTAAGTGGTTGTTCTCTCGACCATTTTTTTTAAAAAACTTTGAAAATAAGTTTGACAGCCTACCGATCCAGTCTTAATAT GCGCCCCGTCCACACAGCAACACGCAGCACTGACTGTTTGGGGCTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCAACGGTTCGATCC CGTTTAGCTCCACCAAATTTACAGTTCAATGCTTGGCCACACCGGCATTGAATCGATCAGCTCTCAGCGCTGATCATTGTTAGAAGGTTTGTGTCCCCTT CGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTTACAGAAGCAGCACTTCGGTGTTGCTCC
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| Amino Acid Sequence |
>glutamyl-tRNA synthetase
MTTVRTRIAPSPTGDPHVGTAYIALFNYCFAKQHGGEFILRIEDTDQLRSTRESEQQIYDALRWLGITWSEGPDVGGPHGPYRQSERSDIYKQYTQQLVD MGHAFPCFCTAEELDQMRAEQMAKGETPRYDGRALLLSKEEVARRLAAGEPHVIRMKVPTEGVCVVPDLLRGDVEIPWDRMDMQVLMKTDGLPTYFLANV VDDHLMGITHVLRGEEWLPSAPKLILLYEYFGWEQPQLCYMPLLRNPDKSKLSKRKNPTSVTFYERMGFMPEAMLNYLGRMGWSMPDEREKFSLQEMVDN FDLSRVSLGGPIFDIEKLSWLNGQWLRDLPLDQFASRVQQWALNPEYMMKIAPLVQGRVETFSQIAPLAGFFFSGGLQLDAKLFEHKKLSGDQVRQLMQL ILWKLESLRQWEKDAITGCIQTVVDALELKLRDAMPLMFASITGQASSVSVLDAMEILGPDLTRFRLRQALELLGGVSKKENKEWEKLFNAIG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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