Pseudomonas fluorescens AU12644, AA054_RS21520
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU12644 Contig_29, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGATGGCGCGGGTCAAAGCCGTGTTGCGCCGCCAGTCCGCGCCCGTACCGGGTGCGCCGGGCAGCGAAGACGAAAGCGTCACGTTCGGTGATTACGAGTT GTCACTGGCCACCCGCGAACTCAAACGCGGTGATGAAGTTCACATGCTGACCACCGGTGAGTTTGCGGTGCTTAAAGCGCTGGTCATGCATGCCCGCGAG CCGTTGACACGCGACAAGCTGATGAATCTGGCCCGTGGCCGTGAATGGGATGCGCTGGAGCGTTCAATCGACGTTCAGATCTCCCGCCTGCGCCGCATGA TTGAGCCGGATCCGTCCAAACCGCGTTACATCCAGACAGTCTGGGGCGTGGGTTATGTATTTGTGCCGGACGGCAACGCCACCAAGTGATGGATCATTTG TAGGAGCGGGCCACGCTGGGTGTTCAACACCTGAGTGGCCCGCAATTTCATTTCTGCGGGTATCCCTACGCGCTCCTGCAAACTGCAAAAGCATCAATCT
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| DNA Sequence for Gene |
>AA054_RS21520
ATGAAAACCCCTCTCTGGTTCCCCCAAAGTTTCTTCTCGCGCACCCTCTGGCTGGTATTGATCGTCGTTCTGTTCTCCAAGGCACTGACGTTGGTGTACT TGCTGATGAATGAAGATGTCCTGGTTGATCGTCAATACAGCCACGGCGTTGCGCTTACGCTGCGTGCCTACTGGGCGGCCGATGAGGAAAACCGCGAAAA AATTGCCGATGCCGCCGGATTGATCCGGGTGGTGGGTGGCGGCGTGCCCGAGGGTGAGCAGCATTGGCCTTACAGCGGTGCTTACCAACGTCAGATGCAG GCCGAGCTGGGCGCTGATACCGAGGTTCGCTTGCGGGTGCATTCGCCACCCGCCTTGTGGGTTCGGGCGCCGAGTCTGGGGGATGGCTGGCTGAAAGTGC CGCTGTACCCGCACCCGCTGCGCGGGCAAAAAATATGGAGCGTGCTGGGCTGGTTCTTGGCCATTGGCTTGCTCTCAACTGCGTCGGCGTGGATTTTCGT CAGTCAACTTAACCAGCCGCTCAAACGCCTGGTGTATGCCGCGCGTCAACTGGGTCAGGGCCGCAGCGTGCGGTTGCCGATCAGTGATACGCCGAGTGAG ATGACGGAGGTTTACAGCGCGTTCAACCAAATGGCCGAAGACGTGGAGCAAGCGGGTCGCGAGCGAGAGTTGATGCTGGCGGGGGTTTCCCACGATTTGC GTACGCCGTTGACGCGTCTGCGTTTGTCGCTGGAATTGATGGGCAACCATAACGACCTGACGGACGACATGGTGCGCGATATCGAAGACATGGACGCGAT CCTCGATCAGTTCCTGGCCTTTATTCGCGATGGCCGTGACGAACTGGTCGAAGAGGTGGACTTGTGCGAGCTGGTGCGTGAGGTCGTGGCACCTTACAAC CAGAACGAAGAGCGGGTGCGTTTGCGCCTGCAACCGATTCAGCCGTTTCCGCTGCGCCGGGTATCGATGAAGCGCTTGCTCAACAACCTGATTGGCAACG CGTTGCATCATGCGGGTGAGGATGTGGAAGTGGCCGCCTATGTGTCAGGAGATGTGAGCGCGCCGTATGTGGTGCTCAGCGTGATGGATCGTGGTGCAGG CATCGACCCTTCCGAGCTTGAAGACATCTTCAACCCGTTCATTCGCGGCGATCGTGCCCGCGGCGGAAAGGGGACCGGGCTCGGGTTGGCAATCGTCAAG CGCATCGCGTCGATGCATGGTGGCAATGTCGAGTTACGCAACCGTTCCGGCGGTGGGCTTGAAGCGCGGGTCAGGTTGCCATTGGGGCTGATGTTGCCCC GTGGCGCGGTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGACCTGAGCTAACCACACGCGAGGCTGCCGATGGAGGCAGCCTCGCGTCTTTTTTGGGCGTGGCGGGGGGCGTCAGCCTTTGCCTTTGGTTCTTGTCAG GTTCGGCCCGCTGTTTTTCTCCAGATGTTCAATGATGATTCCGGCCACGTTTTTACCCGTGGTGGTTTCGATCCCTTCCAGACCCGGTGAGGAGTTGACT TCCAGCACTAACGGGCCGTGATTGGAGCGCAGGATGTCCACGCCTGCCACGCTCAACCCCATCACCTTGGCGGCCCGAATGGCGGTCATGCGTTCTTCCG GGGTGATCTTGATCAGGCTGGCGCTGCCGCCACGGTGCAGGTTGGAACGGAACTCACCCGGCTTGGCCTGGCGTTTCATCGCTGCAATCACCTTGTCACC CACCACGAAGCAGCGAATATCGGCGCCGCCAGCTTCCTTGATGTATTCCTGCACCATGATGTTTTGCTTGAGGCCCATGAAGGCTTCGATCACGGACTCT
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| Amino Acid Sequence |
>ATPase
MKTPLWFPQSFFSRTLWLVLIVVLFSKALTLVYLLMNEDVLVDRQYSHGVALTLRAYWAADEENREKIADAAGLIRVVGGGVPEGEQHWPYSGAYQRQMQ AELGADTEVRLRVHSPPALWVRAPSLGDGWLKVPLYPHPLRGQKIWSVLGWFLAIGLLSTASAWIFVSQLNQPLKRLVYAARQLGQGRSVRLPISDTPSE MTEVYSAFNQMAEDVEQAGRERELMLAGVSHDLRTPLTRLRLSLELMGNHNDLTDDMVRDIEDMDAILDQFLAFIRDGRDELVEEVDLCELVREVVAPYN QNEERVRLRLQPIQPFPLRRVSMKRLLNNLIGNALHHAGEDVEVAAYVSGDVSAPYVVLSVMDRGAGIDPSELEDIFNPFIRGDRARGGKGTGLGLAIVK RIASMHGGNVELRNRSGGGLEARVRLPLGLMLPRGAV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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