Pseudomonas fluorescens AU12644, AA054_RS05770 (zipA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU12644 Contig_28, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTGAATCCGGCACCGTTTTGCATGCTCGATGAAGTGGATGCGCCGCTTGATGATGCGAACGTAGGGCGTTATGCCCGTCTGGTTAAAGAGATGTCACAGA CGGTGCAGTTCATCTACATCACCCACAACAAAATCGCCATGGAAATGGCCGATCAGTTGATGGGGGTGACGATGCACGAGCCCGGTTGTTCGCGTCTGGT GGCGGTTGATGTCGAGGAGGCCATGGCAATGGTGGATGCTTGAGCTATAAGCAAAGAGGGACAAAAAAATCTTTGTGTAAGATATTTCCCAAAGAGTTGA CCGATTTGGTTTGCATGCTTGTAGGGCTTCGGCATAGCTCAATGCGACAGACGGTGTAAAGTTATCTTTGGTCGTGCTAATTTAGCGTCTAATTTTTTTA TACGTGGGTAAAACGCCATTCAGAACATAGAGTTGGCGCCACGCTTTAAAGGGCTTTAGGCTCTTCTTCATAGAATCATTTTTTAGGGGCACGGGATTAC
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| DNA Sequence for Gene |
>AA054_RS05770
|zipA
ATGGAAATCGGTCTGCGCGAGTGGCTGATCGTCATCGGCATAGTGGTCATCGCCGGTATTCTTTTTGATGGCTGGCGCCGCATGCGCGGTGGCAAAGGCA AGCTCAAGTTTCGTCTTGATCGAAGCTTCTCAAACCTGCCCGACGAGGAGGAGACCAGCGCCGAGTTGCTCGGGCCTCCGCGAGTGCTGGACACCCCGCA TCACAAAGAGCCGCAACTTGATGAGCACGACCTGCCATCGGTGAGCATGCCGCCTCGTGAGAAAGGCGCCAAGCGCGGCAAGCGTGGCAGCGAGCCAAGC CAAGGCGACTTGAACCTCAATCTGGACCTGGAAGACGACGGCCCGAGCCTCAGCGCCGCCCGTGATGACTTCCCGGCAGAATCGAAACCGGCCCGCGGTC GTGCCACGGCCAGCCCGTCGGTATCGGCAGTGGCTGAAGAGAAAGAAGCGCCGCAAGCGGCAGAAGAAGTGCTGGTCATTAGTGTCATCAGCCGCGACCC GGCGGGCTTCAAGGGGCCAGCCCTGTTGCAGAACATTCTGGAAAGCGGCCTGCGCTTTGGCGAGATGGATATTTTCCACCGCCACGAAAGCATGGCCGGC AATGGCGAAGTGCTGTTTTCGATGGCCAACGCTGTGAAGCCGGGTGTATTCGATCTGGACGATATCGACCTGTTCAGTACGCCTGCCGTGAGCTTCTTCC TGGGGCTGCCGGGGCCGCGTCATCCCAAGCAGGCGTTTGATGTGATGGTGGCCGCGGCGCGCAAGCTGTCGCAGGAATTGAACGGCGAGCTCAAAGATGA CCAGCGCAGCGTGTTAACGGCGCAAACCATCGAGCATTACCGCCAGCGCATCGTTGAATTTGAACGTCGCGCATTGACTCAAAAACGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCCTGTGGGAGTCAGTCTGTTTGCTCCCACTCCAGCGCGAACGAATTAACTCAAGAGCAGCCTCGGCTGCTCTTTTGCATTGTGAGAGAACACCCCATG ACCGCCGCCCATGACCGAATCCTAGCGCTGCGCGCTGAACTGGATCAGCACAACTATCGCTACCACGTGCTCGACGAGCCGAGCATCCCGGACGCCGAAT ACGATCGCCTGTTCCATGAGCTCAAAGCGCTGGAAGCCGAGCATCCCGAGTGGGTCACGCCGGACTCCCCGACCCAGCGGGTGGGCAGCGCTGCGTTGTC GGCCTTCACTCAGGTGCGCCATGAAGTGCCGATGCTGAGTTTGGGCAACGCCTTCGATGAGGCGGACATGCGCGAGTTCGACCGCCGGGTCAATGAAGGG CTGGATTTGCCCTCCGGCGACCTGTTTGGTGGTGGTGCCGAGGTCGAATACAGCTGTGAGCCCAAGCTGGATGGCCTGGCGGTCAGTCTGTTGTACCGGG
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| Amino Acid Sequence |
>cell division protein ZipA
MEIGLREWLIVIGIVVIAGILFDGWRRMRGGKGKLKFRLDRSFSNLPDEEETSAELLGPPRVLDTPHHKEPQLDEHDLPSVSMPPREKGAKRGKRGSEPS QGDLNLNLDLEDDGPSLSAARDDFPAESKPARGRATASPSVSAVAEEKEAPQAAEEVLVISVISRDPAGFKGPALLQNILESGLRFGEMDIFHRHESMAG NGEVLFSMANAVKPGVFDLDDIDLFSTPAVSFFLGLPGPRHPKQAFDVMVAAARKLSQELNGELKDDQRSVLTAQTIEHYRQRIVEFERRALTQKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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