Pseudomonas fluorescens AU12644, AA054_RS05320

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU12644 Contig_28, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGATTTCGCCCGCCAGCCCAAAGTGGCCGCCGCAGCGCGCAAGGCGCGGGTCGATCAGGCCATTACGGAAGTGGGCTTGCAACACGCAAGGGGGCAGTAC CCGGCGCAGTTGTCCGGCGGCATGGCCCAGCGGGTGGCGCTGGCCCGCTGCCTGGCGCGTCAGCCCCAAGTGCTGCTGCTCGACGAACCGTTTGGCGCGC TGGACGAAGTCACCCGCGCCGACATGCAGCAGTTGTAGCTCAGCGTGATTGCGCGGCACAGCACGGCGGCGCTGTTGATTACCCACGATATTGACGAAGC CCTGCTGCTCAGCGACCGGATTCTGCTACTGGGCCACAGCCCGGCGCGGACGGTCGGTGAGTGGCGCATCGACCTTGCGCAACCGCGTGAAGACCGGGTC GATGAGCTGGGCGCTTTGCGCATCGACATTCTCAAAACCCTTCGGCGGGCGAGCCGCACCCCTGACCTTGAACCTTTACGCGACTCGCTGGAGCTAGCAC
DNA Sequence for Gene
>AA054_RS05320
ATGTGCCTGGACGACTTCACACACACTCGGCGTGACATTTTAAAACTCAGCGCCATGCTCACCGCGGCGGGCGCCTTGCCGATGCTCAGCAGCCTGCAGG CCCGTGCGGCGGCCGAGCCGGATGCGCCGGTGCGCATCGGTTACCTGCCGATCACCGACGCCACGCCGTTGCTGGTGGCGCACAACAATGGCCTGTTCGA GGCCGAGGGCATCAAGGCTGAGCGCCCTGTGTTGCTGCGCAGCTGGGCGCAGGTGATCGAAGCCTTTATCTCCGGGCAGGTCAACGTGATTCACTTGCTC TCGCCGATGACGGTGTGGGCGCGTTACGGCAGCAAAGTGCCCGCCAAAGTCGTAGCCTGGAATCACGTGGGCGGCTCCGGGCTGACCGTAGCCCCCGACA TCCAAGAAGTCCGGCAACTGGGCGGGCAATCCATCGCGATTCCGTTCTGGTACTCGATCCACAACGTGGTGGTGCAACAGCTGTTTCGCGACAACGGCTT GCAACCGGTCACACGCCCGGTAGGCAGCACGCTGGCCGCCAATGAAGTGAACCTGGTGGTCATGCCGCCTTCCGACATGCCGCCCGCTTTGGCGACCAAG CGCATCGCCGGGTACATCGTGGCCGAGCCGTTCAATGCCTTGGCCGAAGACTTGAACGTCGGCCGCGTACAGCGTTTCACCGGCGACCTGTGGCGCAATC ACGCGTGCTGCGTGGTGTTCATGCACGAGCATGACCTGAACAACCGGCCTGAATGGTCGCAAAAAGTGGTCAACGCCATCGTCAAGGCGCAGCTCTGGAC CCGCGATAACCGACAGGCCGCCGCCCAGTTGCTGGCCAAGGACGGAGAAAACCGGTACACGCCGCACAGCAGTGCCGTGCTGCAAAAAGTCCTGGCGCCT GCCGCCAGCGATCGCGCGCGCTATGAAGCGGCGGGGGCGATTCAGCATGGCGACTGGGATGAACAGCGCATTGATTTTCAGCCTTATCCCTTTGCCAGCT ATACCGAAGAGCTGGTCACGCGGCTCAAGCACACGCTGATTCAGGGCGACAATCAGTTTTTGGCGGGCCTGGACCCCGCGCATGTGGCGACCGATCTGGT CGATGACCGCTTCGTCAAAAACAGCATCGCCGCCGTGGGCGGGCTCAAGACGTTCGGTTTGCCAGACAGCTTTGAACGCACCGAGGAGTTTGGCTTTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTGGCCCGGCACCTTCCTCCGCGCGGCAATGGCTACTGGGTGGCGCAGGGCTGTTGAGCCTGTTGCTGGCCTGGTGGCTGGGTGTCGAGTGGCTGGGCAG TGAACAGGGGCTGGCGGCCCGCTTTTCGCCGCAAGCCACGTTTGTCAGCCTGTACGAATTACTGGGCAGCGCCCAGTTGTACGAGAACGTTGGGGTGAGC CTAAAGCGCATCGTGGTCAGCCTGGTGATGGCGTTATTGATCGGCGTGCCATTAGGGCTGCTGATAGGCGGCTCGCGCAATCTGGAGGCCGCCACCACGC CCGCCTTTCAATTCCTGCGCATGATTTCGCCGCTGTCCTGGATGCCGGTGGTGGTGATGCTGATGGGCGTGGGCGATCAGCCCATCTACTTCTTGCTGAC CTTTGCCGCCGTGTGGCCGATTTTGCTCAATACCATTGCGGGGGTGCGCCAACTGGACCCGCGCTGGCTGCAACTGAGCCGCAGCTTGAGTGCTACCCGT
Amino Acid Sequence
>ABC transporter substrate-binding protein
MCLDDFTHTRRDILKLSAMLTAAGALPMLSSLQARAAAEPDAPVRIGYLPITDATPLLVAHNNGLFEAEGIKAERPVLLRSWAQVIEAFISGQVNVIHLL SPMTVWARYGSKVPAKVVAWNHVGGSGLTVAPDIQEVRQLGGQSIAIPFWYSIHNVVVQQLFRDNGLQPVTRPVGSTLAANEVNLVVMPPSDMPPALATK RIAGYIVAEPFNALAEDLNVGRVQRFTGDLWRNHACCVVFMHEHDLNNRPEWSQKVVNAIVKAQLWTRDNRQAAAQLLAKDGENRYTPHSSAVLQKVLAP AASDRARYEAAGAIQHGDWDEQRIDFQPYPFASYTEELVTRLKHTLIQGDNQFLAGLDPAHVATDLVDDRFVKNSIAAVGGLKTFGLPDSFERTEEFGF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site