Pseudomonas fluorescens AU11164, AA046_RS09905
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU11164 Contig_8, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGGCGATCAAGACTGTCAACGCCCTGTCTCACTACACTGACTGGACCATCGGCCACGTACACGCCGGGGCGCTGGGCTGGGTGGCGATGATCACCTTTGG CGCGGTCTATCACATGATCCCCAAACTCTATGGCCGTGAGCAGATGCACAGCGTGGCGCTGATCAACCTGCACTTCTGGCTGGCCACGATCGGCACCGTG CTGTACATCGCCTCGATGTGGGTCAACGGCATTACCCAGGGCCTGATGTGGCGGGCGATCAACGATGACGGCACCTTGACCTACTCGTTTGTGGAGTCGC TGCAAGCCACCCACCCAGGCTTCGTGGTGCGCCTGGTGGGCGGAATATTCTTCCTGACGGGCATGTTGCTAATGGCTTACAACGTGTGGCGCACCGTTCG CGTCCCTGACTTCAAAAAAGCCGAACTCTCGGCGCAAATCGCCTGACCTACGCGGCGCACACCTGCGGGTGTGCGCCGCCACGGGCACGGAGCCGTGACC
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| DNA Sequence for Gene |
>AA046_RS09905
ATGATAGAAATAGCCCTGAACATGCTGGCTGTGACCAGCCTCTACTTCTCAATCAGCTGGTGCCTCAAGCATCAGACCGAGCGCGATATCGATGACGCCA GCCTGATCCCGTTCGCGGACGACCCCGAGGTGGCGCGCCGGGTCGAACAAGCCACGGGCAAGACCATTGAGGCGGTACAGGTCAGCGACGAAGCCGTGCG CCCGCCGGGCTGGGGCACCCTGAAGCTCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AACGCGGGTTGCGAACACCTGTAAAGGCGCTTGAGCGCAGACATTGGTTGCATAACCCGGGTCATCGGCGGCATTCTGCCAGACCTGATGTTTTGCGAAC TTTTGATCGACGACGCACTCAATCTGTACAGCCATTACACTTTTTCGGACAGAGCACGCCCATGACTTCCAAGCTGGAACAACTCAAGCAGTTCACCACC GTGGTCGCAGACACCGGCGACCTCGACGCGATTACCCGCCTTAAACCCGTCGACGCCACCACCAACCCGTCGCTGCTGCTCAAAGCGGCCGCGATGCCGG GCTATGCCGAACTTTTGCAAAACGCCATCAGCCACGCCAAGGGCGATGTCGGCCTGGCCTGCGATCACTTCGCGGTGTCTGTGGGTAGCGGTATCTTGAA AGTGATTCCGGGGCGCATCTCGACAGAAGTCGATGCCCGCCTGTCGTTTGACGAACCGGCCTTGCTGCAAAAAGCCAACCAGTTGATCGAGCTGTATGAC
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| Amino Acid Sequence |
>hypothetical protein
MIEIALNMLAVTSLYFSISWCLKHQTERDIDDASLIPFADDPEVARRVEQATGKTIEAVQVSDEAVRPPGWGTLKL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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