Pseudomonas fluorescens AU11164, AA046_RS05485
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU11164 Contig_49, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCTTGAGTTGCTGGAACGCGTGGGCTTGTCGGCCCACGCCCACAAACACCCTGGCCAACTGTCGGGCGGCCAGCAACAGCGTGTGGCGATTGCCCGTGCG CTGGCGATGGACCCGATTGTCATGCTGTTTGACGAACCCACTTCAGCCCTCGACCCGGAAATGGTCAACGAAGTGCTCGACGTGATGGTGCAACTGGCCC ACGAAGGCATGACCATGATGTGCGTCACCCATGAAATGGGCTTTGCCCGCAAAGTGGCCGACCGGGTCATCTTCATGGATCAGGGCAAAATCGTCGAAGA CTGTCAGAAAGATGAGTTCTTTGGCGATGTGAGCGCCCGCTCGCAACGCGCTCAGGACTTCTTGGGCAAGATCCTGCAGCACTGATAACTCAACCACCCG TCAGGGTGTTCGCCACACGCCTGTAACCGGGCGCAGCCTGCGCCCGGTTACAGCATTGGCCACCTCTTTATTGCGCAGTGGTTGACCCAAGGCATCTGTG
|
|
| DNA Sequence for Gene |
>AA046_RS05485
ATGAAATGCGACCCCACACTTTATCGCGGTGCCCCGCCCTCACTTGCCGTGAAACCTCGTCTGCTGCGCCATTGGCTGTTGCCGCCCCTGATTATCCTGC TGACTATCGGCCTCGGGTACGCGGGCTATCGCGTCAGCGAGCATTTCGGTATCCGCGCCCTCAGCGAAAACGGTGAACGCCAGCTGGAGCTGCACGCCCG CACCGTCGAAAGTGAACTCGGCAAATACACCTACCTGCCCAGCTTGCTGGAGCTTGAGTCCAGCGTATCGAAGCTGTTGGCCGACCCGAATTTGCAAAAC CGCAACACCGTCAATCAATACCTAGAAGGCCTCAACCGCCGCAGCCGCAGCCGCGCCATCTATGTCCTCGACACCACGGGGCGGGTGCTGGCCACCAGCA ACTGGCGAGATGCCGACAGCTACCTGGGTGAAGACCTGTCCTTTCGGGCGTACTTTCAAGACGCCGTACGCGGCCAACCGGGGCGCTTCTACGGCATCGG CAGTACCAGCGGCGAGCCCGGTTACTACCTGGCCCACGGTCTGGAAGAACAAGGCAAAATCATCGGCGTCGCGGTCATTAAAGTGCGCCTGGAAGCCCTG GAAGAACGCTGGCAGCGGGCACGGCTTGAAGCCTACGTCAGCGATGAGAACGGCATCATCATCTTGTCCAGCGACCCTACCCGGCGCCTGAAATCAGTCA GACCGCTTTCGGCCGACACCAAAGAAAAACTCGCGCGCAGCCTTCAGTACTACTGGTGGCCGCTCAACGAGCTGCAACCGTTGCAGCGCGAACAGTTGGC CGAAGGCGTCGAGAAAGTCACCTTCGCCACCAACAGCGAAGTCATCACCGATCATCAGCAAGTCAGCTACCTGGCGCAAACGCGCAACCTCAACGACACA CCGTGGGACATCACCCTGCTCACCCCCCTGCAAGACCTGCGTCGCGAGGCGGCGAATCAGGGCATGCTGGTGGCGGTCGGTTTTGCCCTGCTGGCCTTCC TGCTCATCGCGTGGAACGAGCGGCGCAAGGTGATTGCCACCCGGCTGGCCGCACGCGAAGCCCTGCAAGAAGCCAACAATCAGCTGGAACGGAAAATCAC CGAACGCACCACCCACCTGCGCGCCAGTAACGAACGCCTCAAAGGGCAGATACGCGAACGGCGTCAGGCCGAAGACACCCTGCGCCGCGCCCAGGACGAA CTGGTGCAGGCTGGCAAACTTGCTGCGATCGGGCAAATGTCCACCAGCATTGCCCACGAACTCAACCAGCCCTTGGCCGCCTTGCGCACGCTCTCGGGCA ACACGGTCCGGTTCCTGGAGCGTGGCGACTTGAAAGTGGCGGCTGAAAACCTCGGCACCATCAACAACCTGGTGGACCGCATGGGCCGTATCACCGCCAA CCTGCGCTCATTTGCGCGGCGCGGCGACGACGATGGTCATGCCAGCCTGAGCCACGCCGTAGACGCCGCCTTGCAACTGCTCGATGCCCGGCTGGAAGCG TCGGGCGCAAGCGTGCAGCGTGATTTCAGCGACGCCCATTTGAAAATTGACCAGACGCGGCTCGAGCAAATCCTGATCAACCTGATCGGCAACGCGCTTG ATGCCATGCAGGGCCAAAGCACGCCGCCGCACGTGTGGCTCGAAGGCGCTGTCAGCGAAGGCAAATATCGCCTGCAAGTGCGCGACAACGGCCCGGGCAT TGACCCCGAAACCCGCAAGCACCTGTTTGAACCGTTCTTCACCACCAAACCCGGCGAGCAAGGGCTCGGGCTCGGCCTGACCCTGTCAGCCAGCCTCGCG GCCGCCGCCGGTGGCAGCCTGAGCGTTGAATTCCCGGCCAGCGGTGGTGTTGCGTTTGTCCTTTTATTACCGTTGCTGCAACCCGTTAAGGCCGAGCCGC TATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ACCCTGAATTAAGCGTCCTGATTGTCGAAGACGACCCCCATGTCCTGCTGGGTTGCCAGCAGGCGCTGGCCCTGGAAGACATCCGCAGCGAAGGCGTAAG CAGCGCCGAACAAGCCCTGGCACTGGTGGGTGACAATTTCCCCGGCATCGTCATCAGCGATATTCGACTGCCCGGCATTGATGGCCTCGAACTGCTCAAA CGCCTCAAGGCCCGCGACCACAGCCTGCCCGTGGTGTTGATTACCGGGCACGGCGACATTTCCATGGCCGTGGGCGCAATGCGCGATGGGGCCTATGACT TCATGGAAAAACCGTTTTCCCCCGAGCGCCTGGTGGACGTCGTGCGTCGCGCGCTGGAACAACGCAGCCTGGCCCGTGAAGTGTGGTCGCTGCGTCGGCA ACTGGCGGAGCGCGATTCCCTGGAAGGCCGCATCATCGGGCGCTCGCCCGCCATGCAACACTTGCGCGAACTGATTACCAACGTTGCTGATACGTCTGCC
|
|
| Amino Acid Sequence |
>histidine kinase
MKCDPTLYRGAPPSLAVKPRLLRHWLLPPLIILLTIGLGYAGYRVSEHFGIRALSENGERQLELHARTVESELGKYTYLPSLLELESSVSKLLADPNLQN RNTVNQYLEGLNRRSRSRAIYVLDTTGRVLATSNWRDADSYLGEDLSFRAYFQDAVRGQPGRFYGIGSTSGEPGYYLAHGLEEQGKIIGVAVIKVRLEAL EERWQRARLEAYVSDENGIIILSSDPTRRLKSVRPLSADTKEKLARSLQYYWWPLNELQPLQREQLAEGVEKVTFATNSEVITDHQQVSYLAQTRNLNDT PWDITLLTPLQDLRREAANQGMLVAVGFALLAFLLIAWNERRKVIATRLAAREALQEANNQLERKITERTTHLRASNERLKGQIRERRQAEDTLRRAQDE LVQAGKLAAIGQMSTSIAHELNQPLAALRTLSGNTVRFLERGDLKVAAENLGTINNLVDRMGRITANLRSFARRGDDDGHASLSHAVDAALQLLDARLEA SGASVQRDFSDAHLKIDQTRLEQILINLIGNALDAMQGQSTPPHVWLEGAVSEGKYRLQVRDNGPGIDPETRKHLFEPFFTTKPGEQGLGLGLTLSASLA AAAGGSLSVEFPASGGVAFVLLLPLLQPVKAEPL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|