Pseudomonas fluorescens AU11164, AA046_RS16745
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU11164 Contig_47, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TAAGACCGAGAGGGAGATTGCTTTGCTAAGTGATCAGGCTTGCAAACATAGACTCGGGCATTGCGCAAAAGTTCTCTCCCCCTGGCAAGTTTCCTGCGCA CTCGGATTTGGCACGCACGAAAACGCAGCTCGGGCCTTGCCGGCTGCGTCGATAATCTTGTCGTTGAATTTACCTGCTGAAGCCGTACCGCAAGCTCCGC TTCAAAGCCAACGCTGCTCCCCTTCATGATGGGCAACCCTCTATGGAACATTGGCCTGTAGGAAAAGTTCAATATTCCGGCGAGGTGCCGCGCATTGTTT CACTGCATCGTCAGGGTGCTCTACACCCCTGGGGCCCGAACGATTCTGGCAGATTAATTCTGCAAATCGGCATACAGATCCCACACGAGTGAGGCACACT TCGTGCCCGCTGTAGTTTCACAATGCCATAAAGGCCCGGCTATTGTGCCGATCCCCCCCTCTATATACTAGTGGGCGCTTTTTTTGCGGACGTCAGAAGA
|
|
| DNA Sequence for Gene |
>AA046_RS16745
ATGAGCCAACATTTTCAACATGATGTGCTGGTGATTGGCAGCGGCGCTGCCGGTTTGAGCCTCGCGCTTACCCTGCCCAGCCATTTGCGCATTGCAGTCC TGAGTAAGGGCGATCTGGCCAATGGCTCGACGTTCTGGGCACAAGGTGGCGTAGCCGCCGTGCTGGATGATACCGACACCGTTCAATCCCATGTCGAAGA CACGCTTAACGCCGGTGGCGGGCTGTGTCATGAAGACGCCGTGCGTTTCACCGTCGAACACAGCCGCGAAGCCATTCAGTGGCTGATCGATCAAGGCGTG CCCTTCACCCGCGATGAACCTGCCGACCCGCAGCATGCCGGTTTTGAGTTTCACCTCACCCGGGAAGGCGGGCACAGTCATCGGCGCATCATCCACGCCG CCGATGCCACTGGTGCGGCCATTTTCAAAACCTTGCTCGAACAGGCACAGCAGCGGCCCAACATTGAGCTGCTCGAACAACGGGTAGCGGTGGACCTGAT CACCGAGCGCAGACTGGGCCTGGAGGGCGATCGCTGCCTTGGCGCCTATGTACTCAATCGCAGCAGCGGGGAAGTCGACACGTTCGGGGCGCGCTTCACC ATTCTGGCGACCGGCGGAGCCGCCAAGGTCTACCTCTATACCAGCAACCCGGATGGCGCCTGTGGCGATGGTATTGCCATGGCCTGGCGCTCGGGCTGCC GAGTGGCGAATCTGGAGTTCAACCAGTTTCACCCTACCTGCCTGTACCACCCGCAAGCCAAAAGCTTTTTGATCACCGAAGCCCTGCGCGGCGAAGGGGC GCATTTAAAACTGCCAAATGGCGAGCGATTCATGCACCGCTTTGATCCGCGCGGTGAACTGGCGCCTCGCGATATCGTCGCCCGCGCCATTGACCATGAG ATGAAGCGCCTGGGCATTGATTGCGTCTACCTGGACATCAGCCATCAGTCCGAAACATTCATCAAAACCCACTTTCCGACGGTGTATGAACGCTGCCTCG GCTTTTCCATCGACATCACCCGCCAGGCCATCCCGGTCGTCCCGGCCGCGCATTACACCTGCGGCGGCGTGATGGTTGACGCCCATGGCCGAACCGACGT CCCGGGCCTGTATGCCATTGGCGAAACCAGCTTCACCGGCCTGCACGGCGCCAACCGAATGGCCAGCAATTCGTTGCTGGAATGCTTCGTGTACGGCCGT GCAGCCGCTGACGACATCCTCTCGCAATTGCAACAAGTGGCCATTCCAGTGGCCTTGCCCAGTTGGGATGCCAGCCAGGTCACCGACTCGGATGAAGACG TGATCATCGCCCACAACTGGGATGAGCTACGGCGCTTTATGTGGGACTACGTGGGCATCGTACGCACCAACAAGCGATTGCAACGCGCGCAACACCGCGT GCGGTTGTTGCTGGATGAAATCGACGAGTTCTACAGCAACTACAAAGTGAGCCGCGACCTGATCGAGTTACGCAATCTGGCGCAAGTCGCCGAATTGATG ATCCGCAGCGCCATGGCGAGGAAGGAGTCCCGTGGCTTGCATTACACCCTTGACTACCCGGACATGTTGCCCGAAGCACTGGACACTATTCTGGTGCCAA CCACCTACGCCGACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ATTTGAGCCGTACGCGCAAGCGCCTATGCTGATCGGGCGCCAGCGCGTCGCGGGGAATGCACACCGCTCGCACGCGGCGCTCCCCGCGTCGGCTGAAGCG CACAATCACCAACATCGGCAGCGCCATGCTGTCACGACGCAACTGCACCGCTTGCCAACCCGTGGCGCGACTCCATAGCTGCCAGCCCTCGGCCGTACGG CGCAACCCCGTAATAGCCGTCGGGTGAGTCAAGCGAATATGCCGTGGACACACCCAAATCCCATGAGACAGGCACGCTAAAACACCGAGCATGCGGGCCC AGAGGGGAATCGACAGAAGGCATATTGAGATCAGCGCCAAAGACTGGGCTGCGAGATACGCCGCCAGCAAGTGCCCGGAAGCACGCCAGCGGCATTCGAA ATACTTACTTAGGCTGGACACGATCCAGAATCATGCGAACCATGCGCTGCAGCTCAGGGTCCTCAGACTCGCTGCGCTCCATGAACCAGCCAAACATGTC
|
|
| Amino Acid Sequence |
>L-aspartate oxidase
MSQHFQHDVLVIGSGAAGLSLALTLPSHLRIAVLSKGDLANGSTFWAQGGVAAVLDDTDTVQSHVEDTLNAGGGLCHEDAVRFTVEHSREAIQWLIDQGV PFTRDEPADPQHAGFEFHLTREGGHSHRRIIHAADATGAAIFKTLLEQAQQRPNIELLEQRVAVDLITERRLGLEGDRCLGAYVLNRSSGEVDTFGARFT ILATGGAAKVYLYTSNPDGACGDGIAMAWRSGCRVANLEFNQFHPTCLYHPQAKSFLITEALRGEGAHLKLPNGERFMHRFDPRGELAPRDIVARAIDHE MKRLGIDCVYLDISHQSETFIKTHFPTVYERCLGFSIDITRQAIPVVPAAHYTCGGVMVDAHGRTDVPGLYAIGETSFTGLHGANRMASNSLLECFVYGR AAADDILSQLQQVAIPVALPSWDASQVTDSDEDVIIAHNWDELRRFMWDYVGIVRTNKRLQRAQHRVRLLLDEIDEFYSNYKVSRDLIELRNLAQVAELM IRSAMARKESRGLHYTLDYPDMLPEALDTILVPTTYAD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|