Pseudomonas fluorescens AU11164, AA046_RS15815
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU11164 Contig_47, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACAGCTGGGTGTACCGTGCCCGTCCGGATGTGAACTGCATCATCCACACGCACCCCACCCATGTGGCCGCGCTGTCGATGCTGGAAGTGCCGCTGGAGAT TTCGCACATGGACCTCTGCCCGCTGTACGAAGACTGCGCGTTTCTGGAAGGTTGGCCGGGCGTGCCGGTCGGCAATGAAGAGGGCGAACTGATCGCCGGT GCGCTGGGGGACAAGCGGGCAATCCTGCTCTCGCACCACGGTCAATTGTCCACCGGCGCCAGCATTGAAGAAGCCTGCGTCATCGCGCAACTGATCGAGC GGGCAGCCAAACTGCAATTGCTGGCCATGGCCGCAGGCACCCTCAAGCCCATCATCCCGGCCCTGGGCCGCGAAGCCCATGACTGGATCAGCCGCCCCAA ACGTCATGCGGCCGCTTTCAATTACTACGCCCGGCAAAACCTGCGTCGTCATGCCGACTGCCTGAACTGAGCCACCTCCCTCCCCCACAGGACACCCACC
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| DNA Sequence for Gene |
>AA046_RS15815
ATGACGACTCCAGTAATCCACGGCATCATCGGCTACACCATCACCCCGTTCAGCGCAGACGGCAGCGCCATCGACCTGCCCGCGCTCGGGCGCTCCATTG ACCAATTGATCGACAACGGCGTGCACGCCATCGCGCCACTGGGCAGCACCGGCGAAGGCGCGTACCTGAGCGACGCCGAATGGGATCAGGTCAGCGAATT CAGCCTCGCCCACGTGGCCAAACGCGTGCCGACCATTGTCAGCGTCTCCGACCTGACCACCGCCAAAGCCGTGCGCCGCGCCCGCTTTGCTGAACAGCAC GGCGCGGACGTGGTCATGGTGCTGCCGGCTTCCTACTGGAAACTCAGCGAGGCTGAAATCCTGGCCCATTACCGTGCCATCGGCGACAGCATCAACACCC CGATCATGCTCTACAACAACCCGGCCACCAGCGGCACTGACATGTCGGTGGACTTGATCCTGAACATTTTCAACACGGTCGACAACGTGACCATGGTCAA GGAAAGCACGGGCGACATTCAGCGCATGCACCGCTTGCAACAACGAGGGGAAGGCCAAGTGCCGTTCTACAACGGGTGCAACCCGCTGGCACTGGAGGCC TTCGCTGCGGGTGCGAAAGGTTGGTGCACAGCGGCGCCGAACCTGATCCCGGCGCTGAATCTGGCGCTGTATGACGCCGTACTGGCCAACGATCTGAACG CCGCACGCGCGCTGTTCTACCGCCAGTTGCCATTGCTTGAATTCATCCTCAAAGGCGGTCTGCCGGCCACCATCAAGGCGGGTTTGCGCCTGACCGGCCT GGAAGCGGGCGACCCGCGACTGCCCGTGTTCCCGTTGGCCGACGCTGGCGTAACGCAGTTACACGGGTTGCTGGCTCAACTGAAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCTGCTCCGGCCGACGCGCACCGGGCTGCCTCGCCCGGCACGTCGGCCACCGGCCCCTCACAGCTTCTCTTTGATGACCGTGGTGGGCCCATTGCTTTT CACACTGGCAATGCCCTTCTCTCGCGCCGCTTCGGTGCTGTATTGCTCACTGGTGCCGATGATCTGGTGATTGGCCGCCTTCAGGTTGAAATACGGTTTG CCGTCTTTCGCCACCTTGCGGTCATAGCGTTCATCCAGCGGGCTGTTGGCCTGAACCGAAGCAATGCCCTTTTTCGCCGCCTCGTGCGTGGTGTACTGCT CACTCACCAAAATGGTTTCGGCATTCGCTGCTTTCAATACGAATCGGAACTGCCCGTTGCTGGTCTTGCTCAACTCATACCAACCCGACATAGCGTTTCT CCTTGTGGCTGAAGGTCATGTGTCCCCTTCAGTAAAGCGCTCACCCAGCAATTAGCCATTTATCTGTAGGAAAAAAGAAAAGGTGAATTTACATAGAGAC
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| Amino Acid Sequence |
>dihydrodipicolinate synthase
MTTPVIHGIIGYTITPFSADGSAIDLPALGRSIDQLIDNGVHAIAPLGSTGEGAYLSDAEWDQVSEFSLAHVAKRVPTIVSVSDLTTAKAVRRARFAEQH GADVVMVLPASYWKLSEAEILAHYRAIGDSINTPIMLYNNPATSGTDMSVDLILNIFNTVDNVTMVKESTGDIQRMHRLQQRGEGQVPFYNGCNPLALEA FAAGAKGWCTAAPNLIPALNLALYDAVLANDLNAARALFYRQLPLLEFILKGGLPATIKAGLRLTGLEAGDPRLPVFPLADAGVTQLHGLLAQLK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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