Pseudomonas fluorescens AU11164, AA046_RS13340

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU11164 Contig_40, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTTTGTGCTCGACATGGGCGAGCCGGTACGCATCGTGGAACTGGCCGAGAAGATGATTCATTTGTCCGGCCTGAGCATCCGTTCTGACAAGAACCTGCAT GGCGACATCGAGATTGAATTCACCGGCCTGCGCCCTGGTGAAAAGCTATACGAGGAATTGCTGATAGGCGACAACGTGGTTGCGACTCAGCATCCGATGA TCATGAGTGCCAACGAAGACATGTTGTCGTGGGAAGAGCTGAAGAACCGATTGTCCAGTTTGCTGGAAGCTGTCGATAACGATGACTACACCCGCGTTCG TCAGTTGTTGCGCGATACCGTCAGCGGTTATGCCCCAGAAGGTGAGATCGTGGACTGGATCTACCAGCAGCGTCGTTCTGAGCCTTCCTGAGGACATACC CTGCAATTGACACATTTTTGACACTCGCAAGCCATCGTCTAGGTTTTGAGGACAGCTCAGGAAAGCTGTTTCCATTTAACGATGTATTGGAGTGTCAATT
DNA Sequence for Gene
>AA046_RS13340
ATGCGTATCACCCTTGTTCCTTCGTTTGTCATGGCTGTCTTGTTGGGTTTTTCGGGGGCTGTTGTGGCCAACACTGCCCCGGCGTCGCCAGCCCCCGTGG TGTCTGAAGCCGTGATCAGCCCTGAAGCCCAAGTCGTGACCATCAATTTGAACACCGCTGATGAAGCAACCCTGCAGCGTGAATTGTTGGGCGTCGGGGC TGCCAAAGCCAAGGCGATCGTGGCTTACCGCGAAGCCAACGGTGATTTTGCGTCAACGGATGAGTTGATGGAGGTCAAGGGCATTGGTAAGGCGATATTC GAGAAAAACCGGGACAAAGTCGCGATTAACTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGATCCCGTTGAATGAAAAAGGCCAGTCATTGACTGGCCTTTTTGCATGTTGGGGGTCAGGCCGACTTGCCTGAGGCTTTCAACGATGTGCGGGTGACC TCGAGGATTTTCCCGCGAAGCGCTTCGCTTTGCGCACCGCGCGCGAGTACGAGTGCTCCCACCAACGCGGCAAACAACACAATGCTTTGATCTTCGGCAT CTGGCCCTTGAAGTTCGGCCTGGATTTGTTTGAGGCGAGCGTTGATGACGTTGTCGGTGATGGCACTGCGGTTGCCGTTCTGCGCCATCTCGACCGACAT GGTCGGCAGTGGGCAGCCTTCATGGGGGGAGGTGAGGTGCCAGTCGGACAAATACGTATCGATGAAGGTAGGCAGCGGGCTCGGACCGTTGAAGAGTTCA GCGCAGCGTCCATCCACTTCCTCCGCCGCGTGCTGAAGGGCTTTGTCGACCAGCTCATCCTTGGAGGCGAAGTGGGCGTAAAAGCCGCCATGGGTCAGTC
Amino Acid Sequence
>competence protein ComEA
MRITLVPSFVMAVLLGFSGAVVANTAPASPAPVVSEAVISPEAQVVTINLNTADEATLQRELLGVGAAKAKAIVAYREANGDFASTDELMEVKGIGKAIF EKNRDKVAIN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site