Strain | Pseudomonas fluorescens strain AU11164 Contig_28, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGCAACCCGGCCGCACAGCACTCGTTCATCATCACCGAAGAACTGGCGCCCACGGTCAGCCTTGAAGATTTCAGCATCAACTGGGTCAAGCAACCGCCTC AGCCCCGGCTCAAGCACGCGCTGATCGCTGAAGTGGCGCGCATGACCGGCATGATGCACCGCGCAGGCGTCAACCATCGCGACTGCTACATTTGCCACTT TTTGCTGCACACCGACCAACCGGTGACGCCGGACAATTTCCGTCTGTCGATCATCGATTTGCACCGCGCCCAGACCCGCCCGGTCATCAGCCGCCGCTGG CGCAACAAAGACTTGGCAGCGCTGTATTTTTCGGCGCTGGACATCGGCTTGACCCCGCGCGACAAACTGCGTTTTTTGCGTGGTTATTTCCAGATGCCGC TGCGCCAGATCTTGCGCGATGAAGCCCGTCTGTTGGCCTGGCTGGAAGGCAAGGCGAAAAAACTCTACGAACGCAAAGTGCGTTATGGGGATGCACTGTA
|
|
DNA Sequence for Gene |
>AA046_RS01460
ATGGCGGGCTGGAATCTGGACCCGGCCTACAGCGCGCTGGCCCGCGACTTTGGCACCCTGGACGCGGTGTTTGCGCTCAAGGGCGAACACCTGACCCGCG ATCCGCTGTCGGAGGTGATCCGCGTTCAGCGCGAGGGCGTGAATTATTACGTCAAGCGCTACACCGGGGCTGGCAAAGGGCTGCGTCGCTATCTGGGCCG CCCGCGCGTGAAGTCCGAATGGCAGAACCTCAAGCGGTTCGCCAAGTGGGGCATTCCGACGGCTGACGTGGTGGCCTGGGGCCTTGAGCGTAAAGGTCTC GCCTACGCCCGTGGCGCCATGATTACCCGCGAACTGCCCAACACCCGCGACCTCTCGGAGCTGGCCGACAACAACGACCCGTTGCTCAAGGACCGGCGTT GGGTCGATGGAGTCAGCCGCCAGTTGGCGCGTTACACCAAGACCATGCATGACCACCGCTTCACCCATAACGATTTGAAGTGGCGCAACTTGCTGATCGA CGATCAGGCGCAGCTGTATTTGATCGATTGCCCCAACGGCGACTTCTGGCGCGGTTTCTGGCTCAAGTACCGCATCACCAAAGATCTGGCCTGCCTCGAC AAAGTGGCCAAATACCACCTGTCGGCCACCCAGCGCCTGCGGTTTTATTTCCAATACACCGGGCGGACGACGCTCACTGGGGCGGACAAGGAACGCGTCC GTCATATCGTGCGTTTTTTTGAGGGCCGGGAATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CTGATTTTGTGGCAGACGCTGATCGCGCCTTGCTGGAGCGCAATGGACTGGCGGATTTCGATGCGTTGTGGAACCTGCAACTCGATGCGGTGGACGAACC CAACACCAGTCGCGGTGGCTGGAGCAGCGTGTTTCGCATGGACCTCGACGGTCAGGGGTTTTACCTCAAACGTCAAAGCAACTACCTGACCCGCACGCTG CACAGCCCGTTGGGTGAGCCGAGTTTCGCCCGCGAGTTCCGTAATATTCAGCGCTATCAGCAGTTAGGCATTCCCGCGCTGGAAGCGGTGTTTTTTGGTG AGCGCAAAGTCGGGGGCGAGCGTCGGGCCATTCTGATGACCCGTGCGCTAGATGGCTGGAATGACCTCGACTCGTTGCTGGAGCAATGGCCCCAGTTGAG CGCACCCCAGCGCCAGGCGATCTTGCAGGCCTGCGGCCAACTGGCGCGGCGTCTGCACGAGGTGCGTCAGGTGCACGGCTGTTTCTACCCCAAGCACATC
|
|
Amino Acid Sequence |
>heptose kinase
MAGWNLDPAYSALARDFGTLDAVFALKGEHLTRDPLSEVIRVQREGVNYYVKRYTGAGKGLRRYLGRPRVKSEWQNLKRFAKWGIPTADVVAWGLERKGL AYARGAMITRELPNTRDLSELADNNDPLLKDRRWVDGVSRQLARYTKTMHDHRFTHNDLKWRNLLIDDQAQLYLIDCPNGDFWRGFWLKYRITKDLACLD KVAKYHLSATQRLRFYFQYTGRTTLTGADKERVRHIVRFFEGRE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|