Strain | Pseudomonas fluorescens strain AU11164 Contig_25, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GATGCCGACGGCAAAATGAACCTGTCACTGGCGGATATCGGCGGCGGTTTGCTGCTGGTGTCGCAGTTCACGCTGGCCGCCGACACCAAAAGTGGCCTGC GGCCGAGTTTCTCTACGGCTGCGCCACCGGCTCTGGCCGAATCGTTGTTTGACCACCTGCTGAGCGAGGCAAAACGGCTGCATCCGAACGTGGCAGCAGG CCGTTTTGGTGCCGATATGCAGGTGCATTTGGTCAATGATGGCCCCGTGACATTTTTGTTACAAACCTAAAACCCTGAAAAACCGTGATTTCGTCAGAAA ACAGGGTTTTTTAAGCACAAATACTTGCTGTCACTAGATGCGTTGTAACGCGGGCTACTAGATAATCGCGCGCTACACAGAGACTAATCCGACGCGTTGG GGGAATCATTCATTCCTTTGAAGGTCGGAACAGTGCTCGCCAACCCGGCATTCAATCGCTGGCGGTTGGTTTCATCATCTGTATTCGGCGAGGTTTGCTC
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DNA Sequence for Gene |
>AA046_RS00950
GTGATTGTTAGTCCATTTAATGCACCAAAAAAGTCTGCCAAGCGGTTACGCAACGCACTGGTGACGGGCTCTGCGCTCTTTTGCTTGTTCGGTGCGGGTC AACTGTGGGCATTCAGTCTGGATGACGTGGCGGCGCAGGCTAAAACCCTCGCCGAGCAGAAGTACCAAGCTCCGCGCAGCAATCTGCCTAACGAATTTCG CGACATGAAGTTCGCGGACTACCAGAAGATTCGTTTCCGCAACGAGAAAGCTCAGTGGGCTGACGACAAAACGCCTTTCAAATTGTCGTTCTATCACCAG GGCATGCATTTCGACACGCCGGTGAAAATCAACGAAGTCACCGCCACCAAGGTGGAAGAGATCAAGTACGACGCCAGTCGTTTCGATTTCGGTGATGTTC AATTTGACCCGAAAGCTACCGAGAACCTCGGTTGGGCGGGCTTCCGTGTCCTTTATCCGCTGAACAAAGCCGATAAGCAGGACGAAGTCATGACCATGCT CGGCGCCAGTTATTTCCGCGTTGTCGGTAAGGACCAAACCTACGGCCTGTCGGCTCGTGGTCTGGCCATCGACACCGCTTTGCCGTCCGGCGAAGAATTC CCGCGTTTCACCGAGTTCTGGATTGAACGTCCGAAAGCCGGTGACAAGCATCTGGTGATTTTCGCCCTGCTGGATTCGCCTCGTGCTACCGGCGCTTACC GCTTCACGCTGCGCCCGGGTGTCGACACGGTGGTCGACGTCAAGGCGCAAATGTTCCTGCGTGACAAAGTCGGCAAGCTGGGCATCGCCCCGCTGACCAG CATGTACCTGTTCGGCGCCAACCAGCCGTCCAAAGTGCTCAACTACCGCCGCGAACTGCACGATTCGTCGGGCCTGGCGATTCACGCCGGCAACGGTGAG TGGATCTGGCGTCCGCTGAACAACCCCAAGCATTTGTCGGTGAGCAACTTCTCGGTTGAAAACCCGCTGGGCTTTGGCCTGCTGCAACGCGGCCGTGATT TCAGCCACTACGAAGACCTCGACGACAACTACCACAAGCGTCCAAGTGCCTGGATCGAGCCACAAGGCGACTGGGGCAAGGGGACGGTGGATCTGGTCGA AATCCCGACCGCTGACGAGACCAACGACAACATCGTTGCGTTCTGGAGCCCGGAAACTCAGCCTGAGCCGCTCAAGCCTTTCGACTTTGCCTATCGCTTG CACTGGACGATGAACGAAGCCGCCCTGCACCCTAAAGACAGCGCCTGGGCCCAGCAAACACTGCGCTCGACCGGTGACGTCAAGCAGTCCAACCTGATCC GTCAACCGGACGGCAGCGTGGCTTACCTGATCGACTTCGAAGGCCCGTCGCTTGAGAAGTTGCCAGCAGACGCCGCCGTGCGTAGCCAGGTCAGCGTGGG CGATAACGCCGAGCTGGTGGAAAACAACCTGCGCCACAACCCGGAAACCAAGGGCTGGCGTTTGACGTTGCGCTTGAAGGTCAAAGACCCGAGCAAGTCC ACCGAGCTGCGTGCCGCGCTGGTCGCCGATGAAGAACCGGCCCCTGCCGCCCCCTTGACCAAGGCCGAGAAAGCGGCGGCCAAGGCTCAGGAAAAGAAAG AACAGCACAAAGCCAAGGACGCTAAAGCGCCTGCGGCCGAAGCGGCCCCAGCCACACCAGCGCCAGTCAAGACTGAAAAAGTCCTGACCGAGACCTGGAG CTACCAGTTGCCAGCCGATGAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGCTCACGCAGAGTCAGCCTCGCTCAGCGAGTACCTGGCGCACCTACCCTTGAGCGATGAGCAGCGCGCCGAGCTGGCCAGTTGCACATCGTTCGAGGCG TTGCACGAGCGCCTGTCGGCCCATCACGACGTGAGCACCGCCGAGGCCGCTCAGGCGTCGGTGGGCTCACGCCTTAAACTCAGCTCGGCGCACGCGCTGG AAGACGCCGAAATGCTCGGCGTCGATGCCAGCGGCCGGGTGATGCTCAAGGCCACGCCGCCGATTCGTCGCACCAAAGTGGTGCCCGAGCCGTGGCGCAC CAATATCCTGGTGCGTGGTTGGCGGCGCCTGACCGGGCGCAGCAATCCGCCGGCACCGCCCAAAGATGAACGCGTGTTGCCCAAGGCGCGCTGGCGCACG GTGGGTTCGATCCGCCGTTACATCTTGCTGATTCTGATGCTCGGCCAGACCATCGTTGCCGGCTGGTACATGAAAGGCATCATGCCGTATCAGGGCTGGT
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Amino Acid Sequence |
>glucan biosynthesis protein G
MIVSPFNAPKKSAKRLRNALVTGSALFCLFGAGQLWAFSLDDVAAQAKTLAEQKYQAPRSNLPNEFRDMKFADYQKIRFRNEKAQWADDKTPFKLSFYHQ GMHFDTPVKINEVTATKVEEIKYDASRFDFGDVQFDPKATENLGWAGFRVLYPLNKADKQDEVMTMLGASYFRVVGKDQTYGLSARGLAIDTALPSGEEF PRFTEFWIERPKAGDKHLVIFALLDSPRATGAYRFTLRPGVDTVVDVKAQMFLRDKVGKLGIAPLTSMYLFGANQPSKVLNYRRELHDSSGLAIHAGNGE WIWRPLNNPKHLSVSNFSVENPLGFGLLQRGRDFSHYEDLDDNYHKRPSAWIEPQGDWGKGTVDLVEIPTADETNDNIVAFWSPETQPEPLKPFDFAYRL HWTMNEAALHPKDSAWAQQTLRSTGDVKQSNLIRQPDGSVAYLIDFEGPSLEKLPADAAVRSQVSVGDNAELVENNLRHNPETKGWRLTLRLKVKDPSKS TELRAALVADEEPAPAAPLTKAEKAAAKAQEKKEQHKAKDAKAPAAEAAPATPAPVKTEKVLTETWSYQLPADE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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