Pseudomonas fluorescens AU11164, AA046_RS00345
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU11164 Contig_25, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCTATGCCTCAACATCCCTGAATAACTTCAAGCCTGTTGGAAGGGCCTGACCTAAGATGTTTTAAATCTGCGCGGTCTGCTCACTGTTTAATAGCCATTC ACCTTCTGCCATTGCGTTAAGACTTTATATGGCCGAGCGCTTGAACGATTTGATCGTTAAAAAGTGGTCGCGATCACGCTCAAACTTAATCAAACGATCG TCTGGAGCGGCAGGCAAAAACCACTGATACACAGGTACATAAGCCCTTCTGCTTGACTACTGTTTGATCGATTTGGCAGTTTATGCACCCGCGGTGTCGT CTTACTTACCGAAGGGTTTACCTTGCTTGTCGCAGACCTCAACGGCTCCATGCTGGTTGATAGCCCCCTTCATAACGCGCTTCATTCAGCCTTCATACAG AAATTTCACCTGATGTGATCCATGCTCTGGGTATGATTTGGGCCATGTGTTATTGCTCTATGGTCTCTCATTACTCATTCACATCGGACGTCACGCCTTT
|
|
| DNA Sequence for Gene |
>AA046_RS00345
ATGAGCTCGCTGCCCTTCTTGCCGTTTTCCAAACCAACCATCGATGAAGCCACCATTGCTGCCGTGGGCGACGTGTTGCGCTCGGGCTGGATCACCAGCG GGCCAAAGGTTCAGGCATTCGAGGCGCAATTGTCCGAGTACGTGGGCGGTCGCCCGGTGCGCACGTTCAACTCCGGCACGTGCACCATGGAAATCGCCCT GCGCATCGCAGGGATCGGTGCAGGTGACGAAGTCATCACGACGCCGATCTCATGGGTCGCCACTGCCAATGTGATTCTCGAGGTCGGCGCTACGCCGGTG TTTGCCGATATTGATCCGATCACCCGCAATATTGACCTGAAGAAAGCCGAAGCCGCGATTACGCCACGCACCAAAGCCATCATTCCGGTTTACCTCTCCG GCCTGCCGGTGGACATGGACGCCCTGTACGCTCTGGCCAAAAAACATAACCTGCGCGTGGTCGAAGACGCCGCTCAGGCCCTAGGCGCGAGCTGGAACGG GCAGCGCATCGGCGCACGCGGGGATTTCGTGTCGTTCAGTTTCCAGGCCAACAAGAACATCACCTCGTCCGAAGGCGGGTGTTTGGTGCTCAATAACGAA GAAGAAGCGCGTCTGGCTGAGAAATACCGCCTGCAAGGTGTCACCCGTACCGGATTCGATGGCCTGGATGTCGACGTTCTGGGCGGCAAGTTCAACATGA CTGACATTGCGGCTGCCATCGGTCTCGGGCAGTTCGCCCATATCGAGACGATTACCGCGCACCGCCGTGAATTGGCCAAGCATTATTTCGAGTGTTTCGG CCCTGACTTTGAAGCCGAATACGGCGCGCAATTGCCTGTGGCTGATTTCAGCACTACCAATTGGCACTTGTTCCAGCTAGTGCTGCCTGAGCGCAAGGAC GGCCAACCGGCACGGGCTACGTTCATGAAAGACATGCAGGCATTGGGCGTGGGCGTGGGCTATCACTACCCGCCCATTCACTTGCTGAGCCTGTATCGCG CGCAAGGTTTCAAAGAAGGGATGTTCCCCGTCGCAGAACGCGTAGGGCGGCTGATTGTGTCATTGCCGATGTTCACAGCGATGACCAAAGCCGATGTGGA GCGGTCGGTTAAAGCCGTCAAGGCCGTGTTGCAGAACGCGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCGATTTCGCTGCCGGTAGAGAGGTCTACCGGCAGCGACCGTCCCGCCGAGGCTTACTCGCCAATGGCGGCTTTGTAGCCAGCAGCATCCAGCAGTCTGT CCAGCTCAGCGGTGTTGCTTGGCTTGAGCTTGAAGATCCAGCTCGCGTAAGGATCGCTGTTCAGGTTTTCAGGGCTGTCGGCCAGCGTCTCATTGACCGC GATCACTTCACCGGACACTGGCGCATAGATGTCCGAGGCGGCTTTTACCGACTCCACGACGCCTGCGGTGTCGCCTGCGGCAAACACTTTGCCCACTTCG GCCAACTCAACGAACACCACATCCCCCAACGCTTCCTGAGCGTGATCACTGATACCCACAGTGACAGTGCCGTCCGCTTCCAGACGGGCCCACTCGTGAC TTTCGGCAAAGCGCAACTCAGCGGGGATATTGCTCATATTCAGTGTCCTCAATAAGAAATGTCAGCCGCTTGCACACAGCGCAAGCCTGCCGGTAAACGT
|
|
| Amino Acid Sequence |
>aminotransferase DegT
MSSLPFLPFSKPTIDEATIAAVGDVLRSGWITSGPKVQAFEAQLSEYVGGRPVRTFNSGTCTMEIALRIAGIGAGDEVITTPISWVATANVILEVGATPV FADIDPITRNIDLKKAEAAITPRTKAIIPVYLSGLPVDMDALYALAKKHNLRVVEDAAQALGASWNGQRIGARGDFVSFSFQANKNITSSEGGCLVLNNE EEARLAEKYRLQGVTRTGFDGLDVDVLGGKFNMTDIAAAIGLGQFAHIETITAHRRELAKHYFECFGPDFEAEYGAQLPVADFSTTNWHLFQLVLPERKD GQPARATFMKDMQALGVGVGYHYPPIHLLSLYRAQGFKEGMFPVAERVGRLIVSLPMFTAMTKADVERSVKAVKAVLQNA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|