Pseudomonas fluorescens AU11164, AA046_RS09465

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU11164 Contig_2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATCAGGGCCAGCGTATTGAAGAAGGAATATGGTCATGGGGACTTTACGCACATTACTCACGCGTCACCTGCTACTGGCGTGCAGCTTCGGTGCATGGCTG GTGTGCGTGAACGCACAGGCCGATGGCACGGGTGAAATTGTGATTACCCGCCATGTCTACCCACGCGCCGTCGGCAGCATTGTGCCGCCCCCTGATCCCA ACCCCACCACGGTCAATGCCAACCCGGCCGCCCAGATCAATGCCGTCACCACCCACGGCGAACTGGGGGATGGGGACTTTGCTCGCGTCAGCACCGGTTC CAGCATCACCCGTGTCATCAACACCGGCACTGGCAGCGTGCCGGGCCTGCTGAATCAAAACAGCGGCATGCCCGGTTTGACCAGCACTGCACGTGCAGGG GGCGGCAGCGGCGGTGGCTCGCTGGGCTCACTCGGCGGCCAGATCAACCGCAGTGTTGAGCAAGGCATGCGCCCGCTCACCTCGCTGGGCGGGCAATGAC
DNA Sequence for Gene
>AA046_RS09465
ATGAACAACCTCGCGCTGCTCTTGACCGTGCTGGTCGCTGCACCGGTGCTGGCTGACAACAATCAGGCCGAGATCAATGCCTCGGGTGCCCATTACACCG GCAACCTGATGATCAATCAGGCTTCAGGCACTCAGCAGCAGCAAGTCAACAGCCGCGCCATTGCCATTGGCAATCAGGCCCAGTCCACGGCCGGGGTCAC GCAACAACTCACAGGTCAGGCAGACCCCGCGATGAACGCTCGGGCCAGCATTGGCGGCGACTCCTTCAGCCAGGGCAGCGGCCTGCTGGGGGTCAACCAG TCCGCCGGTGCCAACAACCAGATGGTCAACGCTGTGCGGGTTGCCGTAGGCGCCGGACCGCAAAGTATCGATGACAACGCCTTGTCCCAGCAAAACGTGG CGTTGCAACCAAACTCGGGAGCGGGATCACTCAACACGGGCAGCCGCCAGATCGTTACCAGCGATCAGGCCTTCACCGGCAGCCGCGGAGTGGTTCAGGT CAACCAGAGTGCCGGGGTGGGGAACCGCATGGCTAACACCCTGAATGTACGGGTCACGCAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTCGGGTTACGCGAAGTGCAATGACGTATGCCAACACACACATAACTGATGAAGCATGGAGAAACATCATGAAACCAACAATGGCTCTCAAACCACTGGT CTTCGCTCTGGCTGCACTGATGGCTGTGGCAGCACAAGCAGACAGTAATCGCCACCCCACCCCGACACCGGCAGCCACGAGTGGCGCCAGCGCCGTGATC GCTGATGTGCAGGTCAGTCATGACAACAACATCACCAATAACGGCACGCTCAACAGCGCAAAAGTCACTGACTCTGTGAAAAGCACCAACGGCAACGTCG GGGTCAACGTAGCGTCCGGCTCGGGTAACCAGCAGGACAACGCCGCCGCCATTGCCAGCAGTGACCAGAACTTTGTGCTCGGCACTGCGGCGGCCGTCGT GAGCGCCAGCCAGACCAACAGCTACAACAAAGTGAATAACCACGGCACGCAAAACGGCGCCACGCTCAACGACTCCATCCGAAACACCTCCGGCAACATT
Amino Acid Sequence
>autotransporter adhesin
MNNLALLLTVLVAAPVLADNNQAEINASGAHYTGNLMINQASGTQQQQVNSRAIAIGNQAQSTAGVTQQLTGQADPAMNARASIGGDSFSQGSGLLGVNQ SAGANNQMVNAVRVAVGAGPQSIDDNALSQQNVALQPNSGAGSLNTGSRQIVTSDQAFTGSRGVVQVNQSAGVGNRMANTLNVRVTQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site