Pseudomonas fluorescens AU11164, AA046_RS14660
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU11164 Contig_18, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAAGCATTCATGGACAACACGCCGACGATGAGCCTGGCGCCGCAAAGCCAGCGCACCGGGCTGATCGTCCTGCGCTCGTTCGGCAAGTTTTTCGGGCTGG CGGGGGTGCGCCTGGGCTTTGTACTGGCGGAACTCAAGCTGCTCAAGTTGCTCGCTGAGCAAGTCGGCCCGTGGGCGGTCAGCGGGCCGACGCGGGTGTT GGGACAGGCGTGCCTGCTCGACACCGAGGCGCACGCCCGGCAACGCCAGCGCAGCGAACAGGCCAGCCAACGGCTGGTGGCGATGCTCAGCCAGTACGGG TTGCCCGCTCAGGGGGGCTGCGCGCTGTTTCAGTGGCTGATGACCCCGCACGCCGAGTACCTGTACGACTTCATGGCCCGGCGCGGCATTCTCCTGCGCC TGTTTACCCATAACAGCAGCGTGCGTTTCGGCCTTCCCGCCGATGAGGCGCACTGGCTCAAGCTTGAACAGGCTTTGCAGGCTTACACCAAGGAAACCCC
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| DNA Sequence for Gene |
>AA046_RS14660
ATGAGCACGTTGATGGTGCAAGGCACCACGTCCGATGCGGGCAAAAGTACATTGGTGACAGCGTTGTGCCGCTGGTTGACCCGTCAGGGCGTGCGCGTGG TGCCGTTCAAGCCGCAGAACATGGCGCTCAACAGCGCGGTGACGGCCGAGGGCGGCGAAATCGGTCGCGCGCAGGCTGTGCAGGCGCAGGCTGCCGGGTT GGCGCCGCACACCGACATGAACCCGGTGTTGCTCAAGCCCAACAGCGACACCGGCTCGCAAGTGATCATTCACGGGCGCGCCGTGACCAGCATGAACGCC GTGGCCTATCACGATTACAAAGCCATCGCGATGCAGGCCGTACTGGCCTCCCATGACCGCCTGAGTGCGGCCTACCCGGTGGTGATGGTCGAAGGAGCCG GGTCTCCGGCCGAGATCAACCTGCGCGCCGGCGACATTGCGAACATGGGCTTTGCCGAGGCCGTGGACTGCCCGGTAATTCTGATTGCCGACATCAATCG CGGTGGCGTCTTCGCGCACTTGGTCGGCACTCTGGAATTGCTGTCCGAGAGCGAACAGGCGCGGGTTCAGGGTTTTATCATCAACCGTTTTCGTGGCGAT ATTGCCCTGCTGAAACCGGGGCTCGACTGGCTGGAGCAGCGGACCGGCAAACCGGTAATCGGCGTGCTCCCGTATGTCATGGACCTGCACCTGGAAGCCG AGGACGGCATCGACCAGCGCCAGATCAACAAGGCCGACCGGGTGCTCAACGTCGTGGTGCCGGTGCTGCCGCGCATCAGCAACCACACCGATTTCGATCC GCTGCGCCTGCACCCTCAGGTGAATGTGCAATTTGTAGGGCCGGGTCAGCCGATTCCCCCCGCCGACCTGATCATCCTGCCGGGTTCCAAAAGCGTTCGT AGCGACTTGGCCTACCTGCGCGCCAATGGCTGGGACACGGCCATTGAGCGGCATTTGCGCTACGGCGGCCGGGTGTTGGGGATTTGCGGCGGCTTGCAGA TGCTGGGCGAGCAGGTCCACGACCCGCTGGGGCTGGAAGGCGCGCCGGGCTCCAGTGACGGGCTGGGCCTGCTGGCATTCACCACGCAGCTTGAGGCTGA AAAACAACTGCGTAATGTGCGCGGGCGCCTGGCGCTGGAAAACGCCGAGGTCAGCGGTTATGAAATTCACGCCGGTGTAACCCGCGGCAGCGCCCTTGAG CTGCCTGCCGTGCAGCTTGAAGACGGCCGTTGCGATGGCGCTTGCAGCGCCGACGGGCAGATTATCGGGACTTACTTGCATGGTCTGTTCGAGTCGCCGG CAGCCTGCAGCGCCCTGTTGCGCTGGGCCGGGCTGCCTAGCGTTCAGGCAGTGGACTATCACGCGCTGCGCGAGCGGGACATTGAGCGCTTGGCCGATCT GGTGGAAAACCATTTGGACACGGCCCGTCTGCGGCAACTGTGTGGGCTGCAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGGTGTAATCGATGCCGCGGGCTGTTTTGTCTTGAGAGGTGCATGAACATGCTGCAACTGATTTTGGGCGGTGCCCGCTCGGGTAAAAGCCGTCTGGCCG AAAAGCTGGCAGCCGAGTCCGGTTACGCAGTGACGTACATTGCAACCAGCCAGCCGCAGGACGGCGAGATGAGCGAGCGGGTACGGCATCATCGCGAGCG TCGACCTGCGCAATGGGGGCTGATTGAAGAGCCGCTGGCGCTGGCCCGCGTGCTGCGCGAAAACGCCCGTGCCGATACCTGCCTGCTGGTGGACTGCCTG ACGCTGTGGATGACCAACCTGTTGATGCTGGACGACGCGCAACGCCTGACGGCTGAACGCGACGCCCTGTTGGCGTGCCTGGCAGGGTTGCCGGGTGAAA TTCTGTTTGTCAGCAACGAAACCGGGATGGGTGTCGTGCCGCTGGGCGAATTGACTCGCCGCTATGTCGATGAAGCCGGTTGGCTGCATCAAGCCTTGGC
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| Amino Acid Sequence |
>cobyric acid synthase
MSTLMVQGTTSDAGKSTLVTALCRWLTRQGVRVVPFKPQNMALNSAVTAEGGEIGRAQAVQAQAAGLAPHTDMNPVLLKPNSDTGSQVIIHGRAVTSMNA VAYHDYKAIAMQAVLASHDRLSAAYPVVMVEGAGSPAEINLRAGDIANMGFAEAVDCPVILIADINRGGVFAHLVGTLELLSESEQARVQGFIINRFRGD IALLKPGLDWLEQRTGKPVIGVLPYVMDLHLEAEDGIDQRQINKADRVLNVVVPVLPRISNHTDFDPLRLHPQVNVQFVGPGQPIPPADLIILPGSKSVR SDLAYLRANGWDTAIERHLRYGGRVLGICGGLQMLGEQVHDPLGLEGAPGSSDGLGLLAFTTQLEAEKQLRNVRGRLALENAEVSGYEIHAGVTRGSALE LPAVQLEDGRCDGACSADGQIIGTYLHGLFESPAACSALLRWAGLPSVQAVDYHALRERDIERLADLVENHLDTARLRQLCGLQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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