Pseudomonas fluorescens AU11235, AA056_RS04910

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU11235 Contig_55, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGGATAATGTGTGGCCTGCGCTAAAACCGTTGCTTTGATGCTTTTCTAGTCGCAGCGTTTCGGCTAAGGTGGCGCCCCCCCGATTTGGAGCCCCCGATG TCGCGTCCTGCCTGGTCTTTATATGCCTATCAACTGATCGAGCCCGATGAACAGCTCGATTTGTTCGCCTGCCAGGAGGTACGGGTGCATCTGGTGACGC GTCAATTGGAGCTGGGAGGCACCATTGACCGTACGTTGTGCGGCTCGTTGCTGCCTGCGCAGCCGCGTTGGTCGGACGTCACGCGCAAGGTGTTTCAGGA CCACCGCCTCTGCCCGCTGTGCCGCGCAATCATTGAATCGCAGCGCCGCGGCACCGAGCCGATCTGGCCCGAATTGCGCTTTGAACTATGATCTACCTCG TCTGACTGTTTTGGCGAGGTACGCCGCCTCCTGAACCCGGCAGGCTGCGTGTACACTTTCCCCCTTTTGTCCCCCGTTGATTATGCGAAGGATGTTCCGG
DNA Sequence for Gene
>AA056_RS04910
ATGTTGTCGCGCCTACCTGCCGTCACCCGTTGTCTGTCAGTTGCCGCACTGTGTGTGGCAGGCCCTGTTGCTGCTCTTGAGTTTCCGTTGCCACCGCCCG GTGAAGACGTGGTGGGGCAGGTACAGGTCATCAAGGGCCGCTACGAAGACTCCTTCGCAGACTTGGGCAATGAGCATGAGCTGGGCTATTCGGAGATGAT CGCGGCCAACCCCGGCATCGATGCCTGGCTACCGGTCAAAAAGCACCCCGATGGCACGCTGGTAGACACCGACATCGTGTTGCCAACCCAGTTCATCCTG CCACCCGGCAAGCGGGAAGGGATCGTGATCAACCTGGCCGAATACCGGTTGTATTACTTCCCCAAAGGTCAAAACAAGGTGTACACCTTTCCGCTGGGGA TTGGTCGTGAGGGCTGGGGGTCGCCGTTGGGCCAGACCCGAATCACCGCCAAGACGCCGAACCCGACCTGGACGCCCCCTGCGTCGATCAAGGCTGAACA TGCCCGCAATGGTGATCCGCTGCCCAATGTGGTGCCCGCGGGCCCGGACAACCCTCTGGGGCCTTTCAAGTTCACGCTGGGCATGCCGGGTTACCTGATC CATGGTTCCAATGCCAAGTTCGGTATTGGCACGGGCACGAGCCACGGCTGTTTCCGCATGCTGAACAAGAACGTCTTGCAAATGTCGCAGTTGGTGCCTG TGGGGACGCCCGTTCGCATTATCAACGAGCCTTACAAGATGGGCGTAAGTGGCGGCAAGGTGTATCTCGAAGTGCACGAGCCTTTGAACGTCAAAGACGG ATCCCTGCTCGCCAAGAGCGACAAGTCGCATCTGACTCAAGAAGACAAAGAACAAAAGTGGGCTGGTTTCATGAACTTCGTGCTCAAGCACAAAGCACTG GAAAACAGCATTCAGATCGACAAGGAAAAAGCGTTCCCGGTGGTCGTGGCAGAAACGGGAATACCGGCTGAGATCGGAATCAGCACCGCTGTCGTACCGC AAGTGCCTGGTGTGCTCGAAGTGCCAGAAGGGCAATCGCTCGATTACGTGCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGATCTGTTTAAAAGCCGCCGCAGTCACTGACTGCGGCGGCTTTTTAATGCCTGTTGAAAATACCTCAGGCAAAAAAAACCGACCCATAAAATGGGTCG GTTGGTAACAGCCCCGAAGGACTATTACTTGCGGCTTGCTTTTTCAAGCATGCGCAGAGCACGTTCGTTTGCTTCATCAGCAGTCTGTTGTGCTTTTTGA GCAGCAGCCAGCGCTTCGTCAGCTTTACGGTAGGCTTCGTCAGCACGAGCCTGGGAACGTGCTGCTGCATCTTCAGTTGCAGTCAGACGGGCTTCAGTTT CTTTAGATACGCTGCTGCAACCGGTAGCCAGAACTGCGGCCAATGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTCAAGGACTTTCT AATTGAAGCTGCTCCTTCAACATGAGGAAACAGCCGGCGTACATACTACCCATTACTTGTAGTAAGTAAACTGACCTAGCGCAAGAACCAAAAAAAATAA
Amino Acid Sequence
>transpeptidase
MLSRLPAVTRCLSVAALCVAGPVAALEFPLPPPGEDVVGQVQVIKGRYEDSFADLGNEHELGYSEMIAANPGIDAWLPVKKHPDGTLVDTDIVLPTQFIL PPGKREGIVINLAEYRLYYFPKGQNKVYTFPLGIGREGWGSPLGQTRITAKTPNPTWTPPASIKAEHARNGDPLPNVVPAGPDNPLGPFKFTLGMPGYLI HGSNAKFGIGTGTSHGCFRMLNKNVLQMSQLVPVGTPVRIINEPYKMGVSGGKVYLEVHEPLNVKDGSLLAKSDKSHLTQEDKEQKWAGFMNFVLKHKAL ENSIQIDKEKAFPVVVAETGIPAEIGISTAVVPQVPGVLEVPEGQSLDYVQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site