Pseudomonas fluorescens AU11235, AA056_RS11525
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU11235 Contig_5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CATGGGCAACGCAGGCCAAGTAAACTATGCCGCGGCCAAAGCCGGCCTTGAAGGTTTCAGCCGTGCTCTGGCGCGTGAAGTGGGCTCGCGCTCCATCACG GTCAACTCGGTAGCGCCCGGTTTTATCGATACCGACATGACGCGCGAATTGCCTGAAGCACAGCGTGAAGCGTTGCTGACACAGATTCCACTGGGTCGTC TGGGGCAGGCTCAAGAGATCGCGAATGTGGTGTCTTTCCTGGCTTCGGACGGCGCAGCTTACGTGACTGGGGCTACAATCCCGGTCAACGGCGGGATGTA CATGAGTTAAATGTGACGGATTGCTTCAAAAAAATGTCATACGAGCTGTCTAAAATCCGTTATAAAGCTGCATCTTTTTATAGGTAGCCGGTCATTGCGG GGCACGTGCAAAGCTTTCAGTTGAAAAATTGAAAAGCCTTTAGATACACTTGCCCACTGGCCAGCTGCCTGAATTTGTCCATTAGGAGTGAAAACAAGGT
|
|
| DNA Sequence for Gene |
>AA056_RS11525
ATGAGCACCATCGAAGAACGCGTCAAGAAAATCGTTGCCGAGCAACTGGGCGTTAAAGAAGAAGAAGTGACCAACAGCGCTTCCTTCGTTGAAGACCTGG GTGCCGACTCCCTTGACACCGTTGAGCTTGTGATGGCTCTGGAAGAGGAATTCGAGACCGAAATTCCTGACGAAGAAGCTGAGAAGATCACTACTGTACA AGCTGCTATCGATTACGTTACTGCCCACCAGGCGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TAGTTTGTAATCGTTGCACGCTGTCATGGAAAAACCGCACTGCCGCTCAGGCGTGCGGTTTTTTCTTTAGGCGTGATGCAAAGTGTCGTCAATAGAATAA AGGAGAGTGCTGTGTCGCGTAGACGCGTCGTAGTCACCGGTATGGGGATGTTGTCGCCACTGGGTGCGGATGTTCCGAGCACCTGGCAAGGCATTCTGGC AGGCCGCAGTGGCATTGGTCTGATCGAACACACGGATCTTTCTGCCTATTCCACCCGTTTTGGCGGCTCGGTACAGGGCTTTAACGTCGAGGATTACCTC TCCGTCAAAGAAGCCCGAAAACTTGACCTGTTTATTCAATACGGTTTGGCAGCTGGTTTTCAGGCAGTGCGTAATGCCGGCCTTGAAGTCACTGACGCCA ATCGTGAGCGCATCGGTGTGGCGATGGGGTCGGGTATTGGCGGTTTGACCAATATCGAAGAAACCAGCCGTACCTTGCACGAACAAGGCCCACGACGGAT
|
|
| Amino Acid Sequence |
>acyl carrier protein
MSTIEERVKKIVAEQLGVKEEEVTNSASFVEDLGADSLDTVELVMALEEEFETEIPDEEAEKITTVQAAIDYVTAHQA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|