Pseudomonas fluorescens AU11235, AA056_RS01600

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU11235 Contig_46, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CACGTGTTGTCCGTTGCGCTGAGCAAGGCAGGCATCCAGGCCCGCAGTGCCGCGATGTCGATGCCAGACACACTGGTGATGTGTAAAACCATTCAAGTTG AAACCGGCCTGAACGAGCAGGACCTTGAACTGCACGTGCGCCTTGAAGCGGAACACTACGTCCCATACAACCTCGATGAAGCCGCGCTGGATTTCGACGT GTTGGGGCCTTGCGCCGATGACCCGTACCGCACGAACGTATTGCTGGTGGTGTGCCGCCAGCAAGCGCTTGAGTGGCATCAATCGGTTCTGGTGCAGGCT GGCTTGCAGGCGAAGGTCATTGATGTGCGCGATCACGCCCATGCCCGGGGCCTGCACTGGTTGAGTGGCGTGCCCGGTTATCAGCCGGACAACCCGTTTG CCGGGGTGAAAATCCATCCCCGCCTCGCGCCCGAAGCACTCTTCTGCGATGCTGCGCAGCTGTTGACAGCCTGTGGTCTGGCCTTGAGGGGGTTCGATTG
DNA Sequence for Gene
>AA056_RS01600
ATGGCGCGAATCAATTTGTTGCCATGGCGTGAGTGGCTGCGCGAAAAGCGCCGCAAAAGGTATATAGGCATGCTGGTGGCGTTGCTGGTAGTCACGGCTG CGGGTTTGTTTGTGCTGGATCATTTTGTGGACCGCGCCGTGGAGCGGCAGTTGGCGCGTAATGACCTGATCAGGAGCGCCATGGTCCAGTTGGATGGGCG TGCGCAGCAGATCGATCAGTTGAAAGTACGTCGCGAGCAATTGCTGGAGCGCATGCAAACCATCGAGACCCTGCAAGGCAATCGTTCGGGCAGCAGCATC GTGCTTGATCAACTGGCGCGCAGTTTGCCGGAAGGTGTGTACTTCACTGACGTGAAGATGGCCGAGCGCACCATTGCGATCACAGGGGTGGCGCAGTCCA CTGCACGGGTCGCCGAGTTGATGCGCAATCTCGACGCCTCCCATTGGCTTGAAGCCCCCACGTTGATTGAAGTGCGCGCCGAAGACGGTCAGGACGCCAG CCCCGCCCGGTTATTTCACATGACCGTGCTGCAATCGCAAAACGGCCATGATGGCGGGCAGTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGGTCGCGCACTGGCTGGAGAGCCTGCGTACGGTTGACCTGCATGAGTTGAATCTCAAACAGGCCGGGACGTGGTCAGGCAAGCGTAAAGCAGGTGTCGC GACCGGGTTTGTGGCGTTGCTGGTGCTGGCGGGTTATGCGCTCTGGTTGCAGCCCGGGCTGGCCCGGCTTCATGAGCAACGCAGCGCCGAGCCCGTACTC AAAGCCCAACTGGCAAACCGTGCCCAAGAGGCAGCATCACTGGTTGATCACCACCAGCACCTTCAAGCATTACAAACGGCCTTCGACGAGGTGATGCGGC AACTACCGCGCCAGTCCCAGGTGCCGGGGCTGCTGGATGAAGTGTCCCGGCTTGCCCAAAACAGCGGCCTGATCATCGAGCAGATCCAGTGGTTGCCTGA AACACTGCAACCCGCTTACAGCGAGCTCCCTCTGCAATTGAGGGTCGTGGGCGGGTATCACGACCTTGGGGTTTTTCTCAGTGGTATTGCGGGTTTGCCA
Amino Acid Sequence
>pilus assembly protein PilN
MARINLLPWREWLREKRRKRYIGMLVALLVVTAAGLFVLDHFVDRAVERQLARNDLIRSAMVQLDGRAQQIDQLKVRREQLLERMQTIETLQGNRSGSSI VLDQLARSLPEGVYFTDVKMAERTIAITGVAQSTARVAELMRNLDASHWLEAPTLIEVRAEDGQDASPARLFHMTVLQSQNGHDGGQF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site