Pseudomonas fluorescens AU11235, AA056_RS06780

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU11235 Contig_42, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GACGCCATGCTGGCGTGCCGCGAACGCAGCACGTTCATTCCGATTCTGGCCAACAGCTTCGCGCGGCACACCACTGAAGTGCTGGTCGAACATGCCGAGC GCGAGCACGGCGATTCCAAGTACAGCCCGATGCGCCTGATCAACCTGATGTTCGATCTGGTCACCTGCATGACCACCACGCCGTTGCGCCTGCTGAGCAT CATCGGCTTCAGCATGGCTTTGTTGGGCGGGCTGTTCGCCATCCTGTTGATCGTGTTGCGCCTGATCTTTGGGGCGACCTGGGCCGGTGACGGCACGTTC GTCCTGTTTGCGGTGCTGTTTGTGTTCACCGGCGGACAGTTCATTGGCATGGGCCTGCTGGGTGAATACCTGGGCCGCATGTACAGCGATGTGCGGGCCC GGCCACGCTTCTTTATCGAAAAAATCGTGCGCGCCGAGCCGGCCAAGGCTGACGTTTCGACGACCCCTTCTTCTATTTCCACCTCGACACAGGTCCAATC
DNA Sequence for Gene
>AA056_RS06780
ATGAGTTTGAAAGCCGTAGTTTTCGCCTATCACGATATTGGCTGCACCGGCATCGATGCTTTGCTCAACGCCGGGTATGAAATCGCAGCGGTGTTCACCC ATGCTGACGACCCGAAGGAAAACAACTTTTACGGTTCGGTTGCGCAGCTGTGCGCGCGCAAAGGCATCCCGGTGCATGCCCCGGAAGACGCCAACCACCC GTTGTGGGTCGAGCGCATTCGCAAACTGAACGCCGATTACCTCTTCTCGTTCTACTACCGCCATTTGCTGGGCGAAGAACTGCTCGCCAGCGTCAGCCAG GGCGCCTTCAACCTGCATGGCTCGTTGCTGCCGCGCTACCGTGGCCGCGCCCCGGCCAACTGGGTGCTGGTCAACGGTGAAACCGAGACCGGCGTCACCC TGCACCGCATGGTCAAACGCGCGGATGCCGGTGCCATTCTGGCCCAGCAGCGGGTCAGCATCGAACGCAGCGACACCGCGCTGAGCCTGCACGCCAAGCT GCGCGAAAGCGCGGCAGCCTTGTTGGCCGAAACTTTGCCCCTGCTGCCGGAAGGCAAGCTGACCGAAACCCCGCAAGACGAATCCAAAGCCACGTACTTC GGGCGTCGCACCGCCGCTGATGGCCTGCTGCAATGGGCGCGTCCGGCTGAAGAATTGTTCAATCTGGTGCGGGCGGTGACTCAACCGTATCCGGGCGCGT TCTGCGCCGTGGGCGAGCACAAACTGATTGTCTGGGCCGCCGAGGTGATGCCGGGCAATGCAGGGCTGGCGCCGGGCCACGTCATCAGCTGTGAGCCCCT GCGCATTGCCTGCGGCAAAGACTCGCTTGTCATCACCGCCGGTCAACGCAACGCCGACGGCCTGTACCTGAGCGGCCCGCAACTGGCCCGCGAACTGGGT CTGGTGGACGGCTCGCGCCTGCGCGGCAGTGAATCCGGGCGCCCTGCCCGCCGCACCCGCGTGCTGATCCTCGGGGTCAACGGGTTTATCGGTAACCACC TGTCCGAGCGCCTGCTGCAAGACGACCGCTACGAAGTGTATGGCCTGGACATCGGCTCCGACGCCATTGACCGCCTGCGCAGCCACCCGAACTTCCACTT TGTGGAAGGCGACATCAGCATCCACACCGAGTGGATCGAGTACCACATCAAAAAATGCGACGTGGTCTTGCCGCTGGTGGCCATCGCCACGCCGATCGAG TACACCCGTAACCCGCTGCGGGTGTTCGAGCTCGACTTCGAGGAAAACCTCAAGCTCGTGCGCTACTGCGTCAAATACAACAAGCGGGTGATTTTCCCGT CGACGTCCGAAGTGTATGGCATGTGCCAGGACAAGAATTTCGACGAAGACACCTCCAACCTGATCGTCGGCCCGATCAACAAGCAGCGCTGGATCTACTC GGTGTCCAAGCAGTTGCTCGACCGAGTGATTTGGGCTTACGGCCAGAAAGGCCTGAAATTCACCCTGTTCCGTCCGTTCAACTGGATGGGCCCGCGTCTG GACCGTCTGGATTCGGCACGGGTGGGCAGCTCGCGCGCCATTACCCAACTGATTCTGCATCTGGTGGAAGGCACGCCGATCCGTCTGGTGGATGGCGGTG AGCAAAAGCGTTGCTTCACCGACGTGGCCGACGGCATCGAAGCACTGGCGCGCATCATCGAGAACCGCGACGGCAAGTGCGACGGCCAGATCATCAACAT CGGCAACCCGGAAAACGAAGCCAGCATCCGTCAACTGGGCGAAGAGTTACTGCGTCAGTTCGAAGCCCACCCGCTGCGCGACAACTTCCCCCCGTTCGCC GGTTTCCGCGACGTTGAGAGCCAGTCGTTCTACGGCACCGGTTATCAGGACGTCAGTCACCGCAAACCGAGCGTTGAAAACGCCCGTCGCCTGATCGACT GGACACCGACCACCGAACTGAGCGAAACCATTGGCAAGACTCTGGACTTCTTCCTGCGTGAAGCCATGGTAGAAATCGCGGAAAAACGCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGCAAGCAGGCCTGCGTATCGACGTCGACACGTACCGCGGAACCCGAGAAGGGGTTCCGCAACTGCTCGAATTGCTGGATGAAGCTCAGATCAAAGCCAC GTTTTTCTTCAGCGTGGGGCCGGACAACATGGGACGCCATCTGTGGCGGCTGATCAAGCCCCAGTTCTTCTGGAAAATGCTGCGTTCCAAAGCCGCCAGC CTGTATGGCTGGGACATTTTGCTGGCGGGCACCGCCTGGCCGGGCAAACCGATTGGCCAGGAGCTGGGGCACCTGATGCGCCAGACCCTGGCCGCGGGCC ATGAAGTGGGCTTGCACGCGTGGGATCACCACGGCTGGCAAGCCAACGCCGGGCGTTGGTCGCAGGCGCAATTGATCGAGCAGATCCGCCGGGGTGTCGA CACCCTGAGTGACATCACCGGCCAGGCGGTCGAGTGTTCGGCCGCCGCGGGCTGGCGCGCCGATGAACGCGTGGTTGAGGCCAAGCAGGCCTTTGGCTTT
Amino Acid Sequence
>UDP-4-amino-4-deoxy-L-arabinose formyltransferase
MSLKAVVFAYHDIGCTGIDALLNAGYEIAAVFTHADDPKENNFYGSVAQLCARKGIPVHAPEDANHPLWVERIRKLNADYLFSFYYRHLLGEELLASVSQ GAFNLHGSLLPRYRGRAPANWVLVNGETETGVTLHRMVKRADAGAILAQQRVSIERSDTALSLHAKLRESAAALLAETLPLLPEGKLTETPQDESKATYF GRRTAADGLLQWARPAEELFNLVRAVTQPYPGAFCAVGEHKLIVWAAEVMPGNAGLAPGHVISCEPLRIACGKDSLVITAGQRNADGLYLSGPQLARELG LVDGSRLRGSESGRPARRTRVLILGVNGFIGNHLSERLLQDDRYEVYGLDIGSDAIDRLRSHPNFHFVEGDISIHTEWIEYHIKKCDVVLPLVAIATPIE YTRNPLRVFELDFEENLKLVRYCVKYNKRVIFPSTSEVYGMCQDKNFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGQKGLKFTLFRPFNWMGPRL DRLDSARVGSSRAITQLILHLVEGTPIRLVDGGEQKRCFTDVADGIEALARIIENRDGKCDGQIINIGNPENEASIRQLGEELLRQFEAHPLRDNFPPFA GFRDVESQSFYGTGYQDVSHRKPSVENARRLIDWTPTTELSETIGKTLDFFLREAMVEIAEKR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site