Pseudomonas fluorescens AU11235, AA056_RS21355

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU11235 Contig_40, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCCTGGCCCGCGACGGCGCCCGGGATGCGGTGTTCAACGTCTACGAGTCGCTGTTTATCGAACCGCCCAAAGACCCGACCGTGCAGGTCACGCTGTTGA GCAACCCGCAGATCAAGGTCAAGGGCCAGATCCGCGAAATCACCCCCACCGTGGCCGCCCAAAGCGGCACCCTGCAAATCAAGGTGCAGCTCGATGAACT GCCCAAGGGCATGGATTTGGGCTCGATTGTTACCGTCAACCTGACCCCGCCGCCGAGCCGCAGCATCGAACTGCCCTGGTCGGCGCTGACCAAAGACGTC AGCGAGCCCGCCGTGTGGCTGGTGGACGGCACTAACAACGTGCGCCTGCAACGGGTCAAGGTCGGGCGTTACCTGACCGGCAGCGTGATCATCAATGAAG GCCTCAAAGACGGAGAGCAGGTGGTGGTCGCAGGCGGACAACTGTTGCACCCCGGCATGCAGGTCGAAATTGCCCCCACGCCAGCCGGAGGCACTCAACT
DNA Sequence for Gene
>AA056_RS21355
ATGAAGCCTCTGTGGATGGTGCCCCTGGCGGCCGCCCTGCTGGTCGGTTGCTCTGAAGAAAAAGCCCCCGAGCCGGTGCGCCCCGCGCTGTTCGTGGTGG TCCAGCCCGAGCTGAGGGAACACTTCGGCCGCTTTGCCGGCACGATCGAAGCCCGCTACGAAAGCACGTTGGGCTTTCGTGTGCCGGGGCGCATTGTGCG GCGGTATTACGACGTGGGCGCGGTGGTCAAACAGGGCGATATTCTGGCCAACCTCGACCCCACCGATCAGCAGAACCAACTGCGTTCGGCGCAAGGCGAT CTGGCCAAGGTGCAGGCACAGCTCATCAACGCGCAGGCCAACGCCCGGCGCCAGCAAGAACTGTTCGACCGTGGCGTCGGCGCCCAAGCGCAACTCGACA CCGCCCAGGCCGACCTGAAAACCACCGCCGCGTCGATGCAACAGGCCGTGGCGGCGGTCAATCAGGCGCAAGACCAACTCAGTTACTGCAACCTGCGCGC TGACCATGACTCCGTCATCACCGACTGGAAGGCCGAAGCGGGCCAAGTGGTGAGCATCGGTGAAGAGGTCGTCACGCTGGCCCGCCCCGAAATCAAGGAA GCCGTGATCGACCTGCCGGGGCCATTGGCCGAGGCGTTGCCCAAAGGCATCGAATTTCAAGTGGCAGGGCAGCTCGATCCCAACGTGAAAACCACCGCCC GTGTGCGGGAAATCGCCCCACAGGCCGACAGCGCCACCCGTACCCGGCGTACCCGCCTGACACTGGACCAGACGCCACTCGCGTTCCGCCTGGGCAGTTC GGTCAGCGTGACGGTCAGCAGCCCGATTGCCGAGCATTTCGAGCTGCCCGTCACCGCCCTGCAAGAAACCGACGGCAAAACCCGCGTATGGATCATTGAC ACGCCCTCGCACACCGTCAGCCCGCATGAGGTCACTGTGCTGCGCCGCGACGCGCACACGGCGCTGTTGAGCGGCGGCCTTAAAGGCGGCGACAAAGTGG TCATCGCCGGGGTCAACAGCCTCACGCCCGGACAGAACGTCAGACTGGATAAGGAAAGCTCGCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATGGGAAGAAGTTCAACCTGTCCGAGTGGGCCCTGAAGCATCAGTCGTTTGTCTGGTATTTGATGTTCGTCTCGGTGCTTGCCGGGATCTTTTCGTACAT GAACCTGGGGCGCGCCGAAGATCCGAGCTTCGCCATCAAAACCATGGTGATCCAGACCCGCTGGCCGGGCGCCACGGTCGATGAAACCATGCTGCAGGTC ACGGACCGGATCGAGAAAAAACTCGAAGAACTCGACTCCCTCGACTACGTACAAAGCTACACCCGACCCGGTGAATCCACGGTGTTCGTGTTCCTCAAGG ACACCACCGAGGCCAAGGCGATCCCACAGATCTGGTACCAGGTGCGCAAGAAGATCGACGACATTCGCGGCGACTTCCCCCAAGGCATTCAAGGCCCGGG GTTCGACGACGAATTCGGGGATGTGTACGGCACGATTTACGCCTTCACCGGCGACGGCTTCACCATGCGCCAGCTGCGCGACTACGTCGAGCACGTGCGC
Amino Acid Sequence
>RND transporter
MKPLWMVPLAAALLVGCSEEKAPEPVRPALFVVVQPELREHFGRFAGTIEARYESTLGFRVPGRIVRRYYDVGAVVKQGDILANLDPTDQQNQLRSAQGD LAKVQAQLINAQANARRQQELFDRGVGAQAQLDTAQADLKTTAASMQQAVAAVNQAQDQLSYCNLRADHDSVITDWKAEAGQVVSIGEEVVTLARPEIKE AVIDLPGPLAEALPKGIEFQVAGQLDPNVKTTARVREIAPQADSATRTRRTRLTLDQTPLAFRLGSSVSVTVSSPIAEHFELPVTALQETDGKTRVWIID TPSHTVSPHEVTVLRRDAHTALLSGGLKGGDKVVIAGVNSLTPGQNVRLDKESSQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site